Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1616

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,679,696	+				-0.8
1,679,704	-				-2.2
1,679,744	+				+0.8
1,679,752	-				-0.2
1,679,752	-				+0.2
1,679,752	-				-1.3
1,679,857	+				-0.6
1,679,890	+				-0.6
1,679,890	+				+0.1
1,679,896	-				-0.1
1,679,901	-				-0.2
1,679,922	+				-0.8
1,679,924	+				-0.3
1,679,928	+				+0.5
1,679,946	-				+0.4
1,680,025	-				+1.3
1,680,037	+				-1.3
1,680,068	-				-0.2
1,680,154	+		Dshi_1615	0.12	+0.2
1,680,458	-		Dshi_1615	0.64	-0.2
1,680,775	+				-1.3
1,680,818	-		Dshi_1616	0.11	+0.2
1,680,953	+		Dshi_1616	0.22	-1.4
1,681,017	+		Dshi_1616	0.28	-1.0
1,681,227	-		Dshi_1616	0.45	-1.0
1,681,349	-		Dshi_1616	0.55	-0.3
1,681,364	-		Dshi_1616	0.56	-0.9
1,681,364	-		Dshi_1616	0.56	-1.2
1,681,395	+		Dshi_1616	0.59	-1.3
1,681,829	-				-0.8
1,681,829	-				-0.3
1,681,917	+				-1.6
1,682,049	+		Dshi_1617	0.56	-0.3
1,682,049	+		Dshi_1617	0.56	-1.7
1,682,107	+		Dshi_1617	0.78	-0.8
1,682,209	-				+0.2