Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1432

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,487,230	+				-0.3
1,487,255	-		Dshi_1431	0.13	+0.1
1,487,291	-		Dshi_1431	0.16	-0.3
1,487,298	+		Dshi_1431	0.17	+0.3
1,487,299	-		Dshi_1431	0.17	-0.7
1,487,428	-		Dshi_1431	0.31	-0.0
1,487,460	+		Dshi_1431	0.34	-0.3
1,487,584	-		Dshi_1431	0.47	-1.2
1,487,584	-		Dshi_1431	0.47	-0.2
1,487,648	-		Dshi_1431	0.54	-0.2
1,487,673	-		Dshi_1431	0.56	+0.5
1,487,733	+		Dshi_1431	0.62	-0.6
1,487,779	+		Dshi_1431	0.67	-1.0
1,487,782	-		Dshi_1431	0.68	+0.6
1,487,783	-		Dshi_1431	0.68	-0.5
1,487,783	-		Dshi_1431	0.68	+0.2
1,487,787	-		Dshi_1431	0.68	-0.8
1,487,876	+		Dshi_1431	0.77	+0.4
1,487,884	-		Dshi_1431	0.78	-1.2
1,487,897	+		Dshi_1431	0.80	+0.1
1,487,923	+		Dshi_1431	0.82	-0.8
1,487,931	-		Dshi_1431	0.83	+0.3
1,488,011	-				+1.3
1,488,015	+				-0.5
1,488,015	+				-0.4
1,488,015	+				+0.8
1,488,015	+				+0.7
1,488,023	-				-1.0
1,488,173	-				+1.2
1,488,228	+				+0.3
1,488,258	-				-2.0
1,488,332	+				-1.7
1,488,353	+		Dshi_1432	0.11	-0.5
1,488,363	-		Dshi_1432	0.12	-0.4
1,488,363	-		Dshi_1432	0.12	-0.5
1,488,392	-		Dshi_1432	0.15	+0.1
1,488,424	+		Dshi_1432	0.18	-0.9
1,488,432	-		Dshi_1432	0.18	-0.6
1,488,459	-		Dshi_1432	0.21	-0.1
1,488,478	-		Dshi_1432	0.22	-0.5
1,488,559	+		Dshi_1432	0.29	-0.4
1,488,559	+		Dshi_1432	0.29	-1.2
1,488,559	+		Dshi_1432	0.29	+0.6
1,488,567	-		Dshi_1432	0.30	-0.2
1,488,567	-		Dshi_1432	0.30	-1.0
1,488,567	-		Dshi_1432	0.30	-0.0
1,488,597	+		Dshi_1432	0.33	-0.0
1,488,624	+		Dshi_1432	0.35	-0.0
1,488,652	-		Dshi_1432	0.37	-0.2
1,488,733	-		Dshi_1432	0.44	-0.6
1,488,769	-		Dshi_1432	0.48	-0.4
1,488,771	+		Dshi_1432	0.48	-0.4
1,488,780	+		Dshi_1432	0.49	+0.1
1,488,780	+		Dshi_1432	0.49	-0.1
1,488,788	-		Dshi_1432	0.49	-0.2
1,488,788	-		Dshi_1432	0.49	-0.8
1,488,838	-		Dshi_1432	0.54	-2.7
1,488,896	+		Dshi_1432	0.59	+0.1
1,488,901	+		Dshi_1432	0.59	+0.0
1,488,911	+		Dshi_1432	0.60	+0.0
1,489,022	-		Dshi_1432	0.70	+0.5
1,489,068	+		Dshi_1432	0.74	-0.4
1,489,082	-		Dshi_1432	0.75	+0.7
1,489,115	-		Dshi_1432	0.78	-0.6
1,489,134	-		Dshi_1432	0.79	+0.4
1,489,210	+		Dshi_1432	0.86	-1.2
1,489,259	+				+0.5
1,489,361	-				-0.3
1,489,461	+				-0.1
1,489,556	-				-0.3
1,489,564	-				-2.5
1,489,585	+				+0.1
1,489,593	-				-1.2
1,489,593	-				+0.5
1,489,593	-				-0.2
1,489,603	-				+0.4
1,489,631	+				+0.2
1,489,638	+				-0.4
1,489,646	-		Dshi_1433	0.11	+0.2
1,489,656	+		Dshi_1433	0.12	-1.1
1,489,671	+		Dshi_1433	0.15	-0.3
1,489,678	+		Dshi_1433	0.16	-0.3
1,489,678	+		Dshi_1433	0.16	+0.2
1,489,678	+		Dshi_1433	0.16	-0.6
1,489,678	+		Dshi_1433	0.16	-0.1
1,489,678	+		Dshi_1433	0.16	-0.5
1,489,678	+		Dshi_1433	0.16	+0.8
1,489,678	+		Dshi_1433	0.16	-0.3
1,489,686	-		Dshi_1433	0.17	+0.5
1,489,686	-		Dshi_1433	0.17	-1.0
1,489,686	-		Dshi_1433	0.17	-0.3
1,489,722	+		Dshi_1433	0.23	+0.5
1,489,738	+		Dshi_1433	0.26	-0.7
1,489,802	+		Dshi_1433	0.37	+0.1
1,489,810	-		Dshi_1433	0.38	+0.6
1,489,860	-		Dshi_1433	0.46	+0.5
1,490,060	-		Dshi_1433	0.80	-0.3
1,490,158	+				+0.1
1,490,236	+		Dshi_1434	0.24	+0.2
1,490,307	+		Dshi_1434	0.57	-0.0