Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5386

Experiment: 4-Hydroxyacetophenone 0.00025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyacetophenone 0.00025 M
6,189,458	+		Pf6N2E2_5385	0.37	+0.7
6,189,458	+		Pf6N2E2_5385	0.37	+0.3
6,189,459	-		Pf6N2E2_5385	0.37	-0.0
6,189,501	-		Pf6N2E2_5385	0.40	+1.2
6,189,719	+		Pf6N2E2_5385	0.56	+0.9
6,189,720	-		Pf6N2E2_5385	0.56	+0.4
6,189,740	+		Pf6N2E2_5385	0.57	+0.1
6,189,740	+		Pf6N2E2_5385	0.57	+0.2
6,189,740	+		Pf6N2E2_5385	0.57	+0.1
6,189,741	-		Pf6N2E2_5385	0.57	+1.5
6,189,806	+		Pf6N2E2_5385	0.62	-1.4
6,189,806	+		Pf6N2E2_5385	0.62	-0.4
6,189,807	-		Pf6N2E2_5385	0.62	-2.5
6,189,807	-		Pf6N2E2_5385	0.62	+0.0
6,189,807	-		Pf6N2E2_5385	0.62	-0.5
6,189,807	-		Pf6N2E2_5385	0.62	-0.2
6,189,929	+		Pf6N2E2_5385	0.71	+0.0
6,189,929	+		Pf6N2E2_5385	0.71	+0.9
6,189,929	+		Pf6N2E2_5385	0.71	+0.7
6,189,930	-		Pf6N2E2_5385	0.71	-0.3
6,189,930	-		Pf6N2E2_5385	0.71	+0.1
6,190,176	-		Pf6N2E2_5385	0.88	-0.5
6,190,199	+		Pf6N2E2_5385	0.90	-0.2
6,190,199	+		Pf6N2E2_5385	0.90	+0.5
6,190,199	+		Pf6N2E2_5385	0.90	+1.4
6,190,200	-		Pf6N2E2_5385	0.90	-0.4
6,190,200	-		Pf6N2E2_5385	0.90	+0.2
6,190,200	-		Pf6N2E2_5385	0.90	-0.4
6,190,200	-		Pf6N2E2_5385	0.90	-0.8
6,190,200	-		Pf6N2E2_5385	0.90	+0.8
6,190,200	-		Pf6N2E2_5385	0.90	-0.7
6,190,200	-		Pf6N2E2_5385	0.90	-0.3
6,190,200	-		Pf6N2E2_5385	0.90	-0.6
6,190,341	+				+0.2
6,190,341	+				+0.2
6,190,341	+				-0.1
6,190,341	+				+0.5
6,190,341	+				+0.3
6,190,342	-				-1.1
6,190,342	-				-0.1
6,190,342	-				+0.1
6,190,414	+				-2.4
6,190,415	-				-0.5
6,190,416	+				+0.4
6,190,416	+				-1.1
6,190,416	+				+0.4
6,190,431	+				-0.2
6,190,432	-				+0.9
6,190,432	-				+0.2
6,190,442	+				-0.2
6,190,442	+				-2.4
6,190,442	+				-0.5
6,190,442	+				-0.8
6,190,442	+				+2.2
6,190,442	+				+0.0
6,190,446	+				+0.8
6,190,446	+				-1.0
6,190,511	-				-0.4
6,190,665	+		Pf6N2E2_5386	0.19	+0.9
6,191,004	+		Pf6N2E2_5386	0.48	-0.2
6,191,057	+		Pf6N2E2_5386	0.53	+0.4
6,191,057	+		Pf6N2E2_5386	0.53	-0.6
6,191,057	+		Pf6N2E2_5386	0.53	+0.9
6,191,057	+		Pf6N2E2_5386	0.53	-1.0
6,191,057	+		Pf6N2E2_5386	0.53	+0.7
6,191,057	+		Pf6N2E2_5386	0.53	+0.3
6,191,057	+		Pf6N2E2_5386	0.53	+0.6
6,191,057	+		Pf6N2E2_5386	0.53	-0.0
6,191,057	+		Pf6N2E2_5386	0.53	+1.0
6,191,058	-		Pf6N2E2_5386	0.53	+0.9
6,191,058	-		Pf6N2E2_5386	0.53	+0.3
6,191,058	-		Pf6N2E2_5386	0.53	+0.6
6,191,058	-		Pf6N2E2_5386	0.53	+1.2
6,191,058	-		Pf6N2E2_5386	0.53	+1.6
6,191,058	-		Pf6N2E2_5386	0.53	-0.2
6,191,067	-		Pf6N2E2_5386	0.54	-0.6
6,191,345	+		Pf6N2E2_5386	0.77	+0.4
6,191,346	-		Pf6N2E2_5386	0.77	+0.0
6,191,417	+		Pf6N2E2_5386	0.83	+0.5
6,191,418	-		Pf6N2E2_5386	0.84	+0.7
6,191,506	-				+0.2
6,191,584	+				-0.6
6,191,584	+				+1.0
6,191,584	+				-0.4
6,191,585	-				-2.7
6,191,585	-				+0.7
6,191,585	-				-0.6
6,191,624	+				-0.2
6,191,625	-				-0.7
6,191,628	+				+1.1
6,191,628	+				+2.2
6,191,628	+				-1.3
6,191,629	-				-0.9
6,191,629	-				-1.7
6,191,806	+		Pf6N2E2_5387	0.11	-0.9
6,191,806	+		Pf6N2E2_5387	0.11	+0.3
6,191,806	+		Pf6N2E2_5387	0.11	-0.5
6,191,806	+		Pf6N2E2_5387	0.11	-0.6
6,191,806	+		Pf6N2E2_5387	0.11	-1.0
6,191,806	+		Pf6N2E2_5387	0.11	-1.5
6,191,806	+		Pf6N2E2_5387	0.11	+0.0
6,191,806	+		Pf6N2E2_5387	0.11	-1.2
6,191,806	+		Pf6N2E2_5387	0.11	+0.4
6,191,806	+		Pf6N2E2_5387	0.11	-0.1
6,191,807	-		Pf6N2E2_5387	0.11	+0.3
6,191,807	-		Pf6N2E2_5387	0.11	-1.4
6,191,807	-		Pf6N2E2_5387	0.11	-2.0
6,191,807	-		Pf6N2E2_5387	0.11	-0.2
6,191,839	+		Pf6N2E2_5387	0.13	+2.5
6,191,840	-		Pf6N2E2_5387	0.13	-2.4
6,191,840	-		Pf6N2E2_5387	0.13	-0.6
6,191,842	+		Pf6N2E2_5387	0.13	+0.3
6,191,935	+		Pf6N2E2_5387	0.20	-0.1
6,191,935	+		Pf6N2E2_5387	0.20	-0.2
6,191,936	-		Pf6N2E2_5387	0.20	-1.2
6,191,936	-		Pf6N2E2_5387	0.20	+0.6
6,191,959	+		Pf6N2E2_5387	0.21	-0.6
6,191,959	+		Pf6N2E2_5387	0.21	-0.3
6,191,959	+		Pf6N2E2_5387	0.21	-0.2
6,191,960	-		Pf6N2E2_5387	0.21	+0.4
6,192,196	+		Pf6N2E2_5387	0.37	-0.4
6,192,196	+		Pf6N2E2_5387	0.37	+0.2
6,192,196	+		Pf6N2E2_5387	0.37	+0.7
6,192,196	+		Pf6N2E2_5387	0.37	+0.8
6,192,196	+		Pf6N2E2_5387	0.37	-0.3
6,192,196	+		Pf6N2E2_5387	0.37	+0.1
6,192,196	+		Pf6N2E2_5387	0.37	-1.4
6,192,196	+		Pf6N2E2_5387	0.37	-2.8
6,192,196	+		Pf6N2E2_5387	0.37	-0.4
6,192,196	+		Pf6N2E2_5387	0.37	+0.1
6,192,196	+		Pf6N2E2_5387	0.37	+0.2
6,192,196	+		Pf6N2E2_5387	0.37	-0.0
6,192,197	-		Pf6N2E2_5387	0.37	-0.0
6,192,454	+		Pf6N2E2_5387	0.55	-0.5
6,192,455	-		Pf6N2E2_5387	0.55	-0.2
6,192,580	-		Pf6N2E2_5387	0.63	-0.8