Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2838

Experiment: 4-Hydroxyacetophenone 0.00025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyacetophenone 0.00025 M
3,326,439	+		Pf6N2E2_2837	0.26	-0.1
3,326,439	+		Pf6N2E2_2837	0.26	-1.0
3,326,440	-		Pf6N2E2_2837	0.26	+0.8
3,326,616	+		Pf6N2E2_2837	0.47	+0.5
3,326,628	+		Pf6N2E2_2837	0.48	-0.2
3,326,629	-		Pf6N2E2_2837	0.48	-1.0
3,326,743	+		Pf6N2E2_2837	0.61	+0.9
3,326,743	+		Pf6N2E2_2837	0.61	+0.4
3,326,744	-		Pf6N2E2_2837	0.62	-1.3
3,326,744	-		Pf6N2E2_2837	0.62	-0.3
3,326,905	+		Pf6N2E2_2837	0.80	-0.2
3,326,905	+		Pf6N2E2_2837	0.80	+0.2
3,326,905	+		Pf6N2E2_2837	0.80	-0.6
3,326,905	+		Pf6N2E2_2837	0.80	+0.5
3,326,905	+		Pf6N2E2_2837	0.80	-1.1
3,326,905	+		Pf6N2E2_2837	0.80	+0.2
3,326,905	+		Pf6N2E2_2837	0.80	-0.5
3,326,906	-		Pf6N2E2_2837	0.80	+1.5
3,326,906	-		Pf6N2E2_2837	0.80	-0.6
3,326,906	-		Pf6N2E2_2837	0.80	+0.0
3,327,128	-				+0.8
3,327,128	-				+1.5
3,327,150	+				-0.5
3,327,150	+				-0.1
3,327,151	-				-0.5
3,327,328	+				-1.0
3,327,369	+				-1.7
3,327,369	+				-0.5
3,327,369	+				+0.3
3,327,369	+				-0.4
3,327,369	+				-2.2
3,327,369	+				-0.1
3,327,369	+				-0.4
3,327,369	+				+0.2
3,327,370	-				-0.3
3,327,370	-				+0.1
3,327,370	-				+1.1
3,327,370	-				-0.7
3,327,725	+		Pf6N2E2_2838	0.25	+1.2
3,327,890	+		Pf6N2E2_2838	0.38	+0.3
3,327,890	+		Pf6N2E2_2838	0.38	-1.1
3,327,914	+		Pf6N2E2_2838	0.39	-0.4
3,327,915	-		Pf6N2E2_2838	0.40	+0.5
3,327,915	-		Pf6N2E2_2838	0.40	-1.5
3,327,947	+		Pf6N2E2_2838	0.42	-0.3
3,327,947	+		Pf6N2E2_2838	0.42	-2.4
3,327,948	-		Pf6N2E2_2838	0.42	+0.8
3,327,948	-		Pf6N2E2_2838	0.42	-2.8
3,327,948	-		Pf6N2E2_2838	0.42	-1.4
3,328,101	-		Pf6N2E2_2838	0.53	-1.1
3,328,179	+		Pf6N2E2_2838	0.59	-2.8
3,328,180	-		Pf6N2E2_2838	0.59	-0.3
3,328,295	+		Pf6N2E2_2838	0.68	-0.6
3,328,295	+		Pf6N2E2_2838	0.68	-0.5
3,328,295	+		Pf6N2E2_2838	0.68	-1.6
3,328,295	+		Pf6N2E2_2838	0.68	+0.8
3,328,296	-		Pf6N2E2_2838	0.68	-1.5
3,328,296	-		Pf6N2E2_2838	0.68	+0.5
3,328,296	-		Pf6N2E2_2838	0.68	+0.1
3,328,296	-		Pf6N2E2_2838	0.68	-0.7
3,328,370	-		Pf6N2E2_2838	0.73	+0.2
3,328,370	-		Pf6N2E2_2838	0.73	-0.7
3,328,370	-		Pf6N2E2_2838	0.73	+0.5
3,328,391	+		Pf6N2E2_2838	0.75	+0.5
3,328,597	-				-1.4
3,328,597	-				-1.5
3,328,662	+				-0.3
3,328,662	+				+0.1
3,328,662	+				+0.1
3,328,663	-				-1.0
3,328,663	-				-1.3
3,328,677	+				-0.6
3,328,732	-				+0.9
3,328,732	-				+0.4
3,328,824	+				-0.4
3,328,824	+				-0.7
3,328,825	-				-0.0
3,328,825	-				+1.8
3,328,870	+				+0.9
3,328,871	-				+0.5
3,328,989	+		Pf6N2E2_2839	0.14	-0.1
3,328,989	+		Pf6N2E2_2839	0.14	-0.7
3,328,990	-		Pf6N2E2_2839	0.14	+1.4
3,329,222	-		Pf6N2E2_2839	0.42	+1.3
3,329,291	+		Pf6N2E2_2839	0.50	+1.1
3,329,293	+		Pf6N2E2_2839	0.50	+0.1
3,329,293	+		Pf6N2E2_2839	0.50	-0.9
3,329,293	+		Pf6N2E2_2839	0.50	-0.7
3,329,293	+		Pf6N2E2_2839	0.50	+1.1
3,329,293	+		Pf6N2E2_2839	0.50	-0.3
3,329,293	+		Pf6N2E2_2839	0.50	+0.3
3,329,293	+		Pf6N2E2_2839	0.50	-0.0
3,329,294	-		Pf6N2E2_2839	0.50	-0.1
3,329,294	-		Pf6N2E2_2839	0.50	-0.6
3,329,294	-		Pf6N2E2_2839	0.50	+0.4
3,329,294	-		Pf6N2E2_2839	0.50	+0.8
3,329,294	-		Pf6N2E2_2839	0.50	+1.5
3,329,294	-		Pf6N2E2_2839	0.50	+0.1
3,329,300	+		Pf6N2E2_2839	0.51	-1.7
3,329,404	+		Pf6N2E2_2839	0.63	-0.3
3,329,404	+		Pf6N2E2_2839	0.63	-1.4
3,329,404	+		Pf6N2E2_2839	0.63	+0.1
3,329,404	+		Pf6N2E2_2839	0.63	+0.6
3,329,404	+		Pf6N2E2_2839	0.63	-1.0
3,329,405	-		Pf6N2E2_2839	0.64	-0.2
3,329,405	-		Pf6N2E2_2839	0.64	+1.1
3,329,405	-		Pf6N2E2_2839	0.64	+1.5
3,329,405	-		Pf6N2E2_2839	0.64	+0.2
3,329,405	-		Pf6N2E2_2839	0.64	+0.7
3,329,444	-		Pf6N2E2_2839	0.68	+0.3
3,329,444	-		Pf6N2E2_2839	0.68	+2.2
3,329,486	+		Pf6N2E2_2839	0.73	-1.3
3,329,486	+		Pf6N2E2_2839	0.73	+0.2
3,329,486	+		Pf6N2E2_2839	0.73	-0.9
3,329,486	+		Pf6N2E2_2839	0.73	-0.5
3,329,487	-		Pf6N2E2_2839	0.73	+0.4
3,329,487	-		Pf6N2E2_2839	0.73	+0.5