Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05620 and H281DRAFT_05621 are separated by 128 nucleotides H281DRAFT_05621 and H281DRAFT_05622 are separated by 139 nucleotides
H281DRAFT_05620: H281DRAFT_05620 - glutamate synthase (NADH) large subunit, at 41,247 to 45,950
_05620
H281DRAFT_05621: H281DRAFT_05621 - glutamate synthase (NADH) small subunit, at 46,079 to 47,548
_05621
H281DRAFT_05622: H281DRAFT_05622 - D-amino-acid dehydrogenase, at 47,688 to 49,016
_05622
Position (kb) 46
47
48 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.177 kb on - strand, within H281DRAFT_05620 at 45.217 kb on - strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.442 kb on - strand, within H281DRAFT_05620 at 45.503 kb on + strand at 45.504 kb on - strand at 45.555 kb on + strand at 45.599 kb on + strand at 45.639 kb on + strand at 45.639 kb on + strand at 45.640 kb on - strand at 45.888 kb on + strand at 45.889 kb on - strand at 45.930 kb on - strand at 45.998 kb on + strand at 45.998 kb on + strand at 46.053 kb on + strand at 46.054 kb on - strand at 46.057 kb on + strand at 46.057 kb on + strand at 46.057 kb on + strand at 46.058 kb on - strand at 46.058 kb on - strand at 46.058 kb on - strand at 46.063 kb on + strand at 46.064 kb on - strand at 46.064 kb on - strand at 46.127 kb on + strand at 46.127 kb on + strand at 46.157 kb on + strand at 46.157 kb on + strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.628 kb on + strand, within H281DRAFT_05621 at 46.676 kb on - strand, within H281DRAFT_05621 at 47.105 kb on + strand, within H281DRAFT_05621 at 47.405 kb on + strand at 47.405 kb on + strand at 47.409 kb on - strand at 47.658 kb on + strand at 48.118 kb on + strand, within H281DRAFT_05622 at 48.146 kb on + strand, within H281DRAFT_05622 at 48.392 kb on + strand, within H281DRAFT_05622 at 48.392 kb on + strand, within H281DRAFT_05622 at 48.393 kb on - strand, within H281DRAFT_05622 at 48.393 kb on - strand, within H281DRAFT_05622 at 48.398 kb on + strand, within H281DRAFT_05622 at 48.400 kb on - strand, within H281DRAFT_05622
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 45,152 - H281DRAFT_05620 0.83 -4.6 45,152 - H281DRAFT_05620 0.83 -3.8 45,152 - H281DRAFT_05620 0.83 -3.1 45,152 - H281DRAFT_05620 0.83 -2.7 45,177 - H281DRAFT_05620 0.84 -3.7 45,217 - H281DRAFT_05620 0.84 -5.3 45,441 + H281DRAFT_05620 0.89 -0.9 45,441 + H281DRAFT_05620 0.89 -5.9 45,441 + H281DRAFT_05620 0.89 -3.0 45,441 + H281DRAFT_05620 0.89 -3.1 45,442 - H281DRAFT_05620 0.89 -1.8 45,503 + -1.9 45,504 - -2.5 45,555 + -3.8 45,599 + -4.4 45,639 + -1.6 45,639 + -4.3 45,640 - -1.1 45,888 + +0.1 45,889 - -2.9 45,930 - -3.8 45,998 + +0.1 45,998 + -1.6 46,053 + +0.3 46,054 - -2.6 46,057 + +0.0 46,057 + +0.7 46,057 + -1.1 46,058 - -3.3 46,058 - -3.9 46,058 - -3.5 46,063 + -2.8 46,064 - -2.5 46,064 - -3.2 46,127 + -2.7 46,127 + -4.0 46,157 + -3.6 46,157 + -3.4 46,158 - -4.6 46,158 - -4.3 46,158 - +0.1 46,158 - -2.2 46,158 - -0.5 46,628 + H281DRAFT_05621 0.37 -3.0 46,676 - H281DRAFT_05621 0.41 -3.6 47,105 + H281DRAFT_05621 0.70 -3.9 47,405 + -4.5 47,405 + -2.7 47,409 - -1.0 47,658 + -0.2 48,118 + H281DRAFT_05622 0.32 -0.0 48,146 + H281DRAFT_05622 0.34 +0.6 48,392 + H281DRAFT_05622 0.53 +0.0 48,392 + H281DRAFT_05622 0.53 +0.1 48,393 - H281DRAFT_05622 0.53 +0.2 48,393 - H281DRAFT_05622 0.53 +0.1 48,398 + H281DRAFT_05622 0.53 +1.0 48,400 - H281DRAFT_05622 0.54 +0.2
Or see this region's nucleotide sequence