Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04397 and H281DRAFT_04398 overlap by 4 nucleotides H281DRAFT_04398 and H281DRAFT_04399 are separated by 19 nucleotides H281DRAFT_04399 and H281DRAFT_04400 are separated by 156 nucleotides
H281DRAFT_04397: H281DRAFT_04397 - RNase HI, at 112,332 to 112,778
_04397
H281DRAFT_04398: H281DRAFT_04398 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 112,775 to 113,680
_04398
H281DRAFT_04399: H281DRAFT_04399 - hydroxyacylglutathione hydrolase, at 113,700 to 114,491
_04399
H281DRAFT_04400: H281DRAFT_04400 - membrane-bound lytic murein transglycosylase D, at 114,648 to 116,297
_04400
Position (kb)
113
114
115 Strain fitness (log2 ratio)
-2
-1
0
1 at 112.784 kb on - strand at 113.660 kb on + strand at 113.661 kb on - strand at 113.661 kb on - strand at 113.681 kb on - strand at 113.716 kb on - strand at 113.720 kb on - strand at 113.745 kb on + strand at 113.745 kb on + strand at 113.745 kb on + strand at 113.745 kb on + strand at 113.745 kb on + strand at 113.745 kb on + strand at 113.746 kb on - strand at 113.746 kb on - strand at 113.746 kb on - strand at 113.818 kb on - strand, within H281DRAFT_04399 at 113.854 kb on + strand, within H281DRAFT_04399 at 113.926 kb on - strand, within H281DRAFT_04399 at 114.020 kb on - strand, within H281DRAFT_04399 at 114.057 kb on + strand, within H281DRAFT_04399 at 114.226 kb on - strand, within H281DRAFT_04399 at 114.433 kb on + strand at 114.434 kb on - strand at 114.434 kb on - strand at 114.455 kb on + strand at 114.455 kb on + strand at 114.455 kb on + strand at 114.455 kb on + strand at 114.455 kb on + strand at 114.456 kb on - strand at 114.586 kb on + strand at 114.656 kb on + strand at 114.656 kb on + strand at 114.656 kb on + strand at 114.657 kb on - strand at 114.979 kb on - strand, within H281DRAFT_04400 at 114.984 kb on + strand, within H281DRAFT_04400 at 115.016 kb on + strand at 115.059 kb on + strand, within H281DRAFT_04400 at 115.061 kb on + strand, within H281DRAFT_04400 at 115.131 kb on + strand, within H281DRAFT_04400 at 115.132 kb on - strand, within H281DRAFT_04400 at 115.132 kb on - strand, within H281DRAFT_04400 at 115.149 kb on - strand, within H281DRAFT_04400 at 115.203 kb on + strand, within H281DRAFT_04400 at 115.204 kb on - strand, within H281DRAFT_04400 at 115.204 kb on - strand, within H281DRAFT_04400 at 115.326 kb on + strand, within H281DRAFT_04400 at 115.326 kb on + strand, within H281DRAFT_04400 at 115.327 kb on - strand, within H281DRAFT_04400 at 115.327 kb on - strand, within H281DRAFT_04400 at 115.330 kb on + strand, within H281DRAFT_04400 at 115.330 kb on + strand, within H281DRAFT_04400 at 115.330 kb on + strand, within H281DRAFT_04400 at 115.330 kb on + strand, within H281DRAFT_04400 at 115.330 kb on + strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.331 kb on - strand, within H281DRAFT_04400 at 115.362 kb on + strand, within H281DRAFT_04400 at 115.362 kb on + strand, within H281DRAFT_04400 at 115.362 kb on + strand, within H281DRAFT_04400 at 115.362 kb on + strand, within H281DRAFT_04400 at 115.363 kb on - strand, within H281DRAFT_04400 at 115.413 kb on + strand, within H281DRAFT_04400 at 115.450 kb on - strand, within H281DRAFT_04400
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 112,784 - +0.2 113,660 + -0.1 113,661 - +0.3 113,661 - +0.7 113,681 - -0.0 113,716 - -0.1 113,720 - -1.4 113,745 + +0.3 113,745 + +0.4 113,745 + -1.4 113,745 + +0.2 113,745 + -1.0 113,745 + +0.4 113,746 - -0.6 113,746 - -0.0 113,746 - +0.3 113,818 - H281DRAFT_04399 0.15 -0.1 113,854 + H281DRAFT_04399 0.19 -0.5 113,926 - H281DRAFT_04399 0.29 -0.6 114,020 - H281DRAFT_04399 0.40 -0.3 114,057 + H281DRAFT_04399 0.45 -2.4 114,226 - H281DRAFT_04399 0.66 +1.1 114,433 + -0.2 114,434 - -0.2 114,434 - +0.2 114,455 + +0.5 114,455 + +0.5 114,455 + +1.0 114,455 + -0.1 114,455 + -2.1 114,456 - -1.1 114,586 + +0.1 114,656 + -0.1 114,656 + -0.4 114,656 + +1.1 114,657 - -1.0 114,979 - H281DRAFT_04400 0.20 -0.1 114,984 + H281DRAFT_04400 0.20 +0.9 115,016 + +1.5 115,059 + H281DRAFT_04400 0.25 +0.1 115,061 + H281DRAFT_04400 0.25 +0.2 115,131 + H281DRAFT_04400 0.29 -0.6 115,132 - H281DRAFT_04400 0.29 +0.7 115,132 - H281DRAFT_04400 0.29 -0.0 115,149 - H281DRAFT_04400 0.30 -0.1 115,203 + H281DRAFT_04400 0.34 +0.3 115,204 - H281DRAFT_04400 0.34 -0.1 115,204 - H281DRAFT_04400 0.34 +0.3 115,326 + H281DRAFT_04400 0.41 +0.3 115,326 + H281DRAFT_04400 0.41 +0.2 115,327 - H281DRAFT_04400 0.41 +0.3 115,327 - H281DRAFT_04400 0.41 +0.7 115,330 + H281DRAFT_04400 0.41 +0.5 115,330 + H281DRAFT_04400 0.41 -0.2 115,330 + H281DRAFT_04400 0.41 -0.0 115,330 + H281DRAFT_04400 0.41 +0.7 115,330 + H281DRAFT_04400 0.41 -0.2 115,331 - H281DRAFT_04400 0.41 +0.4 115,331 - H281DRAFT_04400 0.41 +0.7 115,331 - H281DRAFT_04400 0.41 +0.6 115,331 - H281DRAFT_04400 0.41 +0.7 115,331 - H281DRAFT_04400 0.41 +0.6 115,331 - H281DRAFT_04400 0.41 -0.6 115,331 - H281DRAFT_04400 0.41 +0.4 115,362 + H281DRAFT_04400 0.43 +0.4 115,362 + H281DRAFT_04400 0.43 +1.2 115,362 + H281DRAFT_04400 0.43 +0.5 115,362 + H281DRAFT_04400 0.43 +0.1 115,363 - H281DRAFT_04400 0.43 +0.1 115,413 + H281DRAFT_04400 0.46 -0.4 115,450 - H281DRAFT_04400 0.49 +0.4
Or see this region's nucleotide sequence