Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01541 and H281DRAFT_01542 overlap by 1 nucleotides H281DRAFT_01542 and H281DRAFT_01543 overlap by 4 nucleotides H281DRAFT_01543 and H281DRAFT_01544 overlap by 4 nucleotides
H281DRAFT_01541: H281DRAFT_01541 - aldehyde dehydrogenase (NAD+), at 413,417 to 414,874
_01541
H281DRAFT_01542: H281DRAFT_01542 - putative spermidine/putrescine transport system permease protein, at 414,874 to 415,668
_01542
H281DRAFT_01543: H281DRAFT_01543 - putative spermidine/putrescine transport system permease protein, at 415,665 to 416,576
_01543
H281DRAFT_01544: H281DRAFT_01544 - Glycine/D-amino acid oxidase (deaminating), at 416,573 to 417,922
_01544
Position (kb) 415
416
417 Strain fitness (log2 ratio) -2
-1
0
1
2 at 414.823 kb on - strand at 415.284 kb on - strand, within H281DRAFT_01542 at 415.778 kb on + strand, within H281DRAFT_01543 at 416.167 kb on + strand, within H281DRAFT_01543 at 416.217 kb on + strand, within H281DRAFT_01543 at 416.257 kb on + strand, within H281DRAFT_01543 at 416.339 kb on - strand, within H281DRAFT_01543 at 416.602 kb on - strand at 416.602 kb on - strand at 416.850 kb on + strand, within H281DRAFT_01544 at 417.307 kb on - strand, within H281DRAFT_01544
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 414,823 - +0.6 415,284 - H281DRAFT_01542 0.52 +0.2 415,778 + H281DRAFT_01543 0.12 +0.8 416,167 + H281DRAFT_01543 0.55 -0.1 416,217 + H281DRAFT_01543 0.61 +1.9 416,257 + H281DRAFT_01543 0.65 -2.3 416,339 - H281DRAFT_01543 0.74 -0.1 416,602 - -1.2 416,602 - +1.2 416,850 + H281DRAFT_01544 0.21 +0.3 417,307 - H281DRAFT_01544 0.54 -0.4
Or see this region's nucleotide sequence