Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31530

Experiment: L-Threonine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Threonine (C)
3,293,505	-		PGA1_c31510	0.77	+0.4
3,293,546	-		PGA1_c31510	0.83	+1.2
3,293,570	+		PGA1_c31510	0.87	-0.4
3,293,588	+		PGA1_c31510	0.90	-0.8
3,293,588	+		PGA1_c31510	0.90	-1.3
3,293,613	+				-0.3
3,293,620	+				-0.4
3,293,630	+				-0.7
3,293,635	-				+0.5
3,293,638	-				+0.2
3,293,689	-				+0.2
3,293,737	-				+2.7
3,293,748	+				-0.2
3,293,748	+				-0.7
3,293,748	+				-0.6
3,293,748	+				-1.1
3,293,748	+				-0.8
3,293,748	+				-1.6
3,293,748	+				+0.7
3,293,756	-				+1.5
3,293,756	-				+1.2
3,293,756	-				+0.3
3,293,756	-				+0.7
3,293,756	-				+0.6
3,293,756	-				-1.7
3,293,756	-				+0.2
3,293,756	-				-0.1
3,293,756	-				+0.1
3,293,756	-				+0.7
3,293,761	+				+0.7
3,293,761	+				-1.1
3,293,761	+				+1.0
3,293,761	+				-0.7
3,293,761	+				-0.3
3,293,769	-				+1.0
3,293,769	-				-0.7
3,293,769	-				-1.0
3,293,769	-				+0.4
3,293,769	-				+1.4
3,293,769	-				+1.3
3,293,770	-				-1.3
3,293,781	-				-0.3
3,293,782	-				+0.2
3,293,796	+				-1.1
3,293,796	+				-0.8
3,293,796	+				-0.7
3,293,818	+				+1.4
3,293,823	+				-3.1
3,293,831	-				+1.3
3,293,833	-				-0.7
3,293,833	-				+0.2
3,293,837	+				+0.0
3,293,854	-				+0.2
3,293,859	-				+0.6
3,293,906	-		PGA1_c31520	0.13	+0.6
3,293,911	+		PGA1_c31520	0.15	-0.5
3,293,914	-		PGA1_c31520	0.15	+0.4
3,293,914	-		PGA1_c31520	0.15	-1.2
3,293,947	+		PGA1_c31520	0.26	+0.0
3,293,955	-		PGA1_c31520	0.28	+0.0
3,294,034	-		PGA1_c31520	0.52	+0.4
3,294,060	+		PGA1_c31520	0.60	-0.8
3,294,060	+		PGA1_c31520	0.60	+0.2
3,294,060	+		PGA1_c31520	0.60	-1.3
3,294,060	+		PGA1_c31520	0.60	-0.6
3,294,060	+		PGA1_c31520	0.60	+1.1
3,294,068	-		PGA1_c31520	0.63	+0.3
3,294,068	-		PGA1_c31520	0.63	-0.1
3,294,068	-		PGA1_c31520	0.63	+0.7
3,294,068	-		PGA1_c31520	0.63	-0.8
3,294,068	-		PGA1_c31520	0.63	+0.2
3,294,078	-		PGA1_c31520	0.66	-0.1
3,294,113	+		PGA1_c31520	0.77	+0.5
3,294,126	-		PGA1_c31520	0.81	+1.0
3,294,196	-				-0.8
3,294,206	+				+2.1
3,294,206	+				-3.1
3,294,211	+				+0.5
3,294,211	+				-0.6
3,294,219	-				+0.5
3,294,219	-				-0.7
3,294,261	-				-0.7
3,294,267	+				+0.5
3,294,267	+				+0.1
3,294,271	-				+0.5
3,294,282	+				-0.6
3,294,429	+				-0.1
3,294,474	-				-0.5
3,294,506	-				+0.7
3,294,506	-				-1.0
3,294,549	+				-0.9
3,294,559	+				-0.3
3,294,637	+		PGA1_c31530	0.11	+0.7
3,294,641	+		PGA1_c31530	0.11	+0.2
3,294,651	-		PGA1_c31530	0.12	-0.1
3,294,702	+		PGA1_c31530	0.16	-1.3
3,294,702	+		PGA1_c31530	0.16	-0.0
3,294,710	-		PGA1_c31530	0.16	+0.2
3,294,710	-		PGA1_c31530	0.16	-1.1
3,294,724	+		PGA1_c31530	0.17	+0.3
3,294,732	-		PGA1_c31530	0.18	+0.3
3,294,732	-		PGA1_c31530	0.18	-0.5
3,294,732	-		PGA1_c31530	0.18	-1.5
3,294,732	-		PGA1_c31530	0.18	-0.6
3,294,732	-		PGA1_c31530	0.18	-0.7
3,294,732	-		PGA1_c31530	0.18	-0.3
3,294,755	+		PGA1_c31530	0.19	+0.2
3,294,755	+		PGA1_c31530	0.19	+0.3
3,294,755	+		PGA1_c31530	0.19	-0.2
3,294,763	-		PGA1_c31530	0.20	-1.3
3,294,763	-		PGA1_c31530	0.20	-0.1
3,294,797	+		PGA1_c31530	0.23	-1.3
3,294,800	-		PGA1_c31530	0.23	-1.4
3,294,800	-		PGA1_c31530	0.23	-0.3
3,294,800	-		PGA1_c31530	0.23	-1.7
3,294,812	+		PGA1_c31530	0.24	+1.1
3,294,812	+		PGA1_c31530	0.24	-1.0
3,294,814	+		PGA1_c31530	0.24	-0.9
3,294,820	-		PGA1_c31530	0.24	-2.1
3,294,820	-		PGA1_c31530	0.24	-1.3
3,294,836	+		PGA1_c31530	0.25	+0.2
3,294,869	+		PGA1_c31530	0.28	-1.6
3,294,869	+		PGA1_c31530	0.28	-3.7
3,294,887	-		PGA1_c31530	0.29	-1.9
3,294,887	-		PGA1_c31530	0.29	-0.3
3,294,914	+		PGA1_c31530	0.31	-0.1
3,294,922	-		PGA1_c31530	0.31	-1.3
3,294,946	+		PGA1_c31530	0.33	-0.3
3,294,954	-		PGA1_c31530	0.34	-0.1
3,294,980	-		PGA1_c31530	0.36	+0.2
3,295,013	-		PGA1_c31530	0.38	-0.5
3,295,013	-		PGA1_c31530	0.38	-0.6
3,295,018	-		PGA1_c31530	0.38	-0.4
3,295,018	-		PGA1_c31530	0.38	-0.6
3,295,018	-		PGA1_c31530	0.38	-0.3
3,295,025	+		PGA1_c31530	0.39	-2.1
3,295,036	+		PGA1_c31530	0.40	+0.2
3,295,036	+		PGA1_c31530	0.40	+1.0
3,295,036	+		PGA1_c31530	0.40	-0.1
3,295,036	+		PGA1_c31530	0.40	+0.4
3,295,038	-		PGA1_c31530	0.40	-0.4
3,295,044	-		PGA1_c31530	0.40	-0.5
3,295,044	-		PGA1_c31530	0.40	-1.3
3,295,044	-		PGA1_c31530	0.40	+0.3
3,295,044	-		PGA1_c31530	0.40	-0.5
3,295,044	-		PGA1_c31530	0.40	+1.4
3,295,085	+		PGA1_c31530	0.43	-3.1
3,295,142	+		PGA1_c31530	0.47	-0.4
3,295,142	+		PGA1_c31530	0.47	-0.1
3,295,150	-		PGA1_c31530	0.48	-0.3
3,295,150	-		PGA1_c31530	0.48	+1.1
3,295,150	-		PGA1_c31530	0.48	-0.8
3,295,168	-		PGA1_c31530	0.49	-0.4
3,295,225	+		PGA1_c31530	0.53	-0.3
3,295,225	+		PGA1_c31530	0.53	+0.1
3,295,244	+		PGA1_c31530	0.55	+1.0
3,295,272	+		PGA1_c31530	0.57	+1.3
3,295,335	+		PGA1_c31530	0.61	+0.2
3,295,440	+		PGA1_c31530	0.69	+0.9
3,295,452	+		PGA1_c31530	0.69	+0.3
3,295,457	+		PGA1_c31530	0.70	-0.3
3,295,457	+		PGA1_c31530	0.70	-0.5
3,295,457	+		PGA1_c31530	0.70	+0.4
3,295,465	-		PGA1_c31530	0.70	-0.2
3,295,470	-		PGA1_c31530	0.71	-0.6
3,295,480	-		PGA1_c31530	0.71	+0.4
3,295,512	+		PGA1_c31530	0.74	-0.0
3,295,520	-		PGA1_c31530	0.74	-0.1
3,295,520	-		PGA1_c31530	0.74	-1.6
3,295,558	-		PGA1_c31530	0.77	+1.2
3,295,617	+		PGA1_c31530	0.81	-1.0
3,295,630	-		PGA1_c31530	0.82	-2.1
3,295,651	-		PGA1_c31530	0.84	-1.5
3,295,662	+		PGA1_c31530	0.85	+0.3
3,295,722	+		PGA1_c31530	0.89	+0.6
3,295,792	+				+0.5
3,295,797	+				+0.6
3,295,805	-				-0.2
3,295,805	-				-0.7
3,296,002	+		PGA1_c31540	0.14	+0.3
3,296,011	+		PGA1_c31540	0.15	-1.4
3,296,055	+		PGA1_c31540	0.20	-0.4
3,296,089	-		PGA1_c31540	0.24	-1.1
3,296,095	-		PGA1_c31540	0.25	-0.3
3,296,098	+		PGA1_c31540	0.25	-1.6
3,296,102	-		PGA1_c31540	0.25	+0.3
3,296,104	+		PGA1_c31540	0.26	-0.3
3,296,106	-		PGA1_c31540	0.26	+0.3
3,296,116	-		PGA1_c31540	0.27	-0.5
3,296,132	+		PGA1_c31540	0.29	-0.1
3,296,140	-		PGA1_c31540	0.30	-0.1
3,296,157	+		PGA1_c31540	0.32	+0.2
3,296,174	+		PGA1_c31540	0.34	+0.4
3,296,179	+		PGA1_c31540	0.35	+0.0
3,296,182	-		PGA1_c31540	0.35	-0.6
3,296,267	+		PGA1_c31540	0.45	-0.3
3,296,267	+		PGA1_c31540	0.45	-0.9
3,296,300	+		PGA1_c31540	0.49	+0.7
3,296,313	-		PGA1_c31540	0.50	+0.4
3,296,318	-		PGA1_c31540	0.51	+0.7
3,296,364	+		PGA1_c31540	0.56	-1.3
3,296,372	-		PGA1_c31540	0.57	-0.7
3,296,388	+		PGA1_c31540	0.59	-0.4
3,296,388	-		PGA1_c31540	0.59	+0.7
3,296,396	-		PGA1_c31540	0.60	-1.6
3,296,430	+		PGA1_c31540	0.64	-0.7
3,296,440	+		PGA1_c31540	0.65	-0.3
3,296,478	-		PGA1_c31540	0.70	+0.0
3,296,479	+		PGA1_c31540	0.70	+0.7
3,296,483	-		PGA1_c31540	0.70	-0.3
3,296,483	-		PGA1_c31540	0.70	+0.6
3,296,535	-		PGA1_c31540	0.76	-0.5
3,296,552	-		PGA1_c31540	0.78	+0.7
3,296,612	+		PGA1_c31540	0.86	-1.4
3,296,612	+		PGA1_c31540	0.86	-1.3
3,296,612	+		PGA1_c31540	0.86	-0.3
3,296,620	-		PGA1_c31540	0.86	+0.0
3,296,688	-				-1.5
3,296,739	-				-0.0
3,296,739	-				+1.1
3,296,775	+				-0.2
3,296,782	+				+0.0
3,296,792	+				-0.4
3,296,813	+		PGA1_c31550	0.11	-0.0
3,296,844	+		PGA1_c31550	0.19	+0.1