Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02586

Experiment: PYE 0.5x 25C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep1 12 days
2,733,104	+				+1.0
2,733,169	+				+0.2
2,733,169	+				+0.6
2,733,177	-		CCNA_03970	0.10	-0.5
2,733,225	-				+2.5
2,733,252	+		CCNA_03970	0.49	-1.7
2,733,301	-		CCNA_03970	0.75	-0.7
2,733,329	+				+0.2
2,733,335	-				-0.6
2,733,337	-				-1.9
2,733,359	-				-2.7
2,733,362	+				+1.1
2,733,388	+				-0.3
2,733,388	+				-0.5
2,733,398	+				-1.1
2,733,403	+				+0.2
2,733,403	+				-1.0
2,733,422	+				-0.9
2,733,422	+				-0.9
2,733,430	-				-0.1
2,733,503	+				-0.1
2,733,511	-				-1.0
2,733,524	-				-0.3
2,733,533	+				-0.3
2,733,537	-				-1.8
2,733,558	+				+0.4
2,733,585	-				-0.2
2,733,592	+				-0.7
2,733,592	+				-0.9
2,733,600	-				+0.9
2,733,600	-				-1.5
2,733,627	+				-0.2
2,733,635	-				+1.5
2,733,699	-				+1.8
2,733,749	+		CCNA_03901	0.14	-0.3
2,733,764	-		CCNA_03901	0.19	+2.5
2,733,775	+		CCNA_03901	0.22	+0.0
2,733,782	+		CCNA_03901	0.24	+0.6
2,733,826	+		CCNA_03901	0.38	+0.5
2,733,834	-		CCNA_03901	0.40	-1.4
2,733,896	+		CCNA_03901	0.59	-0.1
2,733,922	+		CCNA_03901	0.67	-0.8
2,733,930	-		CCNA_03901	0.70	-0.6
2,733,966	-		CCNA_03901	0.81	-0.2
2,733,972	-		CCNA_03901	0.83	-1.1
2,734,033	-				-0.7
2,734,091	+				+0.4
2,734,093	+				+0.5
2,734,093	+				-1.5
2,734,099	-				+0.9
2,734,099	-				-2.0
2,734,123	+				-1.1
2,734,123	+				-1.8
2,734,123	+				-2.1
2,734,131	-				-0.8
2,734,178	+				-2.4
2,734,186	-				+0.2
2,734,189	+				-1.3
2,734,219	+				-2.6
2,734,242	-				+0.5
2,734,317	+		CCNA_02586	0.10	-1.4
2,734,367	+		CCNA_02586	0.12	-1.6
2,734,404	-		CCNA_02586	0.14	-0.3
2,734,425	-		CCNA_02586	0.15	-0.1
2,734,438	-		CCNA_02586	0.15	+0.9
2,734,453	+		CCNA_02586	0.16	-1.9
2,734,576	+		CCNA_02586	0.22	-1.3
2,734,578	+		CCNA_02586	0.22	-2.4
2,734,622	+		CCNA_02586	0.24	-2.1
2,734,630	-		CCNA_02586	0.24	-0.7
2,734,664	-		CCNA_02586	0.26	-0.5
2,734,666	+				+0.2
2,734,666	+		CCNA_02586	0.26	-2.8
2,734,666	+		CCNA_02586	0.26	-2.5
2,734,666	+		CCNA_02586	0.26	-2.0
2,734,666	+		CCNA_02586	0.26	-3.6
2,734,698	+		CCNA_02586	0.27	-2.9
2,734,807	+		CCNA_02586	0.32	-3.6
2,734,815	+		CCNA_02586	0.32	-1.6
2,734,847	+		CCNA_02586	0.34	-2.7
2,734,863	+		CCNA_02586	0.35	-3.6
2,734,898	+		CCNA_02586	0.36	-3.8
2,734,981	+		CCNA_02586	0.40	-1.5
2,734,983	+		CCNA_02586	0.40	-4.0
2,735,060	+		CCNA_02586	0.44	-1.2
2,735,062	+		CCNA_02586	0.44	-3.4
2,735,070	-		CCNA_02586	0.44	+0.2
2,735,070	-		CCNA_02586	0.44	+1.5
2,735,132	+		CCNA_02586	0.47	-2.3
2,735,183	-		CCNA_02586	0.49	+0.5
2,735,233	-		CCNA_02586	0.51	-1.1
2,735,288	+		CCNA_02586	0.54	-3.1
2,735,314	+		CCNA_02586	0.55	-3.5
2,735,322	-		CCNA_02586	0.55	-0.3
2,735,336	+		CCNA_02586	0.56	-3.3
2,735,394	+				-0.5
2,735,450	+		CCNA_02586	0.61	-2.2
2,735,453	-		CCNA_02586	0.61	-1.4
2,735,465	+		CCNA_02586	0.62	-2.9
2,735,481	-		CCNA_02586	0.62	-0.5
2,735,490	+		CCNA_02586	0.63	-3.2
2,735,562	+		CCNA_02586	0.66	-0.5
2,735,627	+		CCNA_02586	0.69	-0.1
2,735,658	-		CCNA_02586	0.70	+0.5
2,735,760	+		CCNA_02586	0.75	-1.7
2,735,778	+		CCNA_02586	0.76	-2.9
2,735,786	-		CCNA_02586	0.76	-1.9
2,735,795	+		CCNA_02586	0.77	-3.3
2,735,795	+		CCNA_02586	0.77	-1.3
2,735,823	+		CCNA_02586	0.78	-2.0
2,735,823	+		CCNA_02586	0.78	-1.8
2,735,852	+		CCNA_02586	0.79	-1.4
2,735,889	+		CCNA_02586	0.81	-4.5
2,735,957	+		CCNA_02586	0.84	-3.9
2,736,043	-		CCNA_02586	0.88	-1.6
2,736,068	-		CCNA_02586	0.89	+0.9
2,736,074	+		CCNA_02586	0.89	-0.3
2,736,093	+				-0.5
2,736,110	+				+0.9
2,736,238	-				-0.1
2,736,276	-				+1.5
2,736,315	+				+1.3
2,736,323	-				+1.8
2,736,323	-				+0.1
2,736,338	+				+0.5
2,736,346	-				+0.0
2,736,348	+				+1.0
2,736,365	-				+0.1
2,736,395	+				+0.4
2,736,442	-				+0.5
2,736,458	+				+0.4
2,736,466	-				+0.7
2,736,577	-		CCNA_02587	0.13	+0.3
2,736,625	+		CCNA_02587	0.16	+2.0
2,736,668	+		CCNA_02587	0.18	-0.3
2,736,681	-		CCNA_02587	0.19	+0.8
2,736,692	+		CCNA_02587	0.19	+1.0
2,736,697	+		CCNA_02587	0.20	+1.0
2,736,705	-		CCNA_02587	0.20	+0.0
2,736,705	-		CCNA_02587	0.20	+1.6
2,736,715	+		CCNA_02587	0.21	-0.0
2,736,811	+		CCNA_02587	0.26	+0.3
2,736,883	+		CCNA_02587	0.30	+0.8
2,736,883	+		CCNA_02587	0.30	+0.3
2,736,883	+		CCNA_02587	0.30	-0.1
2,736,883	+		CCNA_02587	0.30	-0.1
2,736,883	+		CCNA_02587	0.30	+0.0
2,736,883	+		CCNA_02587	0.30	-1.3
2,736,886	-		CCNA_02587	0.30	+0.5
2,736,891	-		CCNA_02587	0.30	+0.4
2,736,891	-		CCNA_02587	0.30	+0.3
2,736,891	-		CCNA_02587	0.30	+0.4
2,736,891	-		CCNA_02587	0.30	-0.2
2,736,891	-		CCNA_02587	0.30	+0.5
2,736,891	-		CCNA_02587	0.30	+0.1
2,736,891	-		CCNA_02587	0.30	+0.1
2,736,891	-		CCNA_02587	0.30	+0.5
2,736,891	-		CCNA_02587	0.30	-0.3
2,736,891	-		CCNA_02587	0.30	-0.6
2,736,891	-		CCNA_02587	0.30	-1.4
2,736,934	-		CCNA_02587	0.33	+0.2
2,736,947	-		CCNA_02587	0.33	-0.1
2,736,960	+		CCNA_02587	0.34	+0.0
2,736,973	+		CCNA_02587	0.35	-0.7
2,736,981	-		CCNA_02587	0.35	+0.0
2,737,090	+		CCNA_02587	0.41	-0.6
2,737,105	+		CCNA_02587	0.42	+0.6
2,737,105	+		CCNA_02587	0.42	-1.4
2,737,110	+		CCNA_02587	0.42	-1.1
2,737,172	+		CCNA_02587	0.46	+0.2
2,737,172	+		CCNA_02587	0.46	-1.8
2,737,172	+		CCNA_02587	0.46	-2.1
2,737,178	+		CCNA_02587	0.46	-1.1
2,737,180	-		CCNA_02587	0.46	-0.2
2,737,180	-		CCNA_02587	0.46	+0.6
2,737,210	+		CCNA_02587	0.48	-0.1
2,737,251	+		CCNA_02587	0.50	-1.1
2,737,265	+		CCNA_02587	0.51	+1.2
2,737,273	-		CCNA_02587	0.51	+0.6
2,737,292	+		CCNA_02587	0.52	-0.4