Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01925

Experiment: PYE 0.5x 25C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep1 12 days
2,069,976	+		CCNA_01924	0.17	-1.1
2,069,991	+		CCNA_01924	0.18	-1.1
2,069,999	+		CCNA_01924	0.19	-1.9
2,070,022	+		CCNA_01924	0.21	-1.5
2,070,098	+		CCNA_01924	0.27	+0.3
2,070,162	+		CCNA_01924	0.33	+0.0
2,070,195	+		CCNA_01924	0.36	+1.0
2,070,198	-		CCNA_01924	0.36	-0.3
2,070,286	-		CCNA_01924	0.43	+0.5
2,070,296	-		CCNA_01924	0.44	+0.1
2,070,309	-		CCNA_01924	0.45	-0.2
2,070,361	+		CCNA_01924	0.50	-0.7
2,070,370	-		CCNA_01924	0.51	-2.1
2,070,370	-		CCNA_01924	0.51	-0.4
2,070,398	-		CCNA_01924	0.53	-1.6
2,070,425	+		CCNA_01924	0.56	-2.5
2,070,442	-		CCNA_01924	0.57	-2.0
2,070,444	+		CCNA_01924	0.57	-0.7
2,070,456	+		CCNA_01924	0.58	-1.9
2,070,466	-		CCNA_01924	0.59	-0.5
2,070,474	-		CCNA_01924	0.60	+0.1
2,070,493	+		CCNA_01924	0.61	-1.4
2,070,506	+		CCNA_01924	0.63	+0.6
2,070,512	+		CCNA_01924	0.63	-0.8
2,070,512	+		CCNA_01924	0.63	+1.3
2,070,522	+		CCNA_01924	0.64	-1.1
2,070,584	+		CCNA_01924	0.69	+0.3
2,070,592	-		CCNA_01924	0.70	-0.1
2,070,601	-		CCNA_01924	0.71	-1.9
2,070,603	+		CCNA_01924	0.71	+0.3
2,070,603	+		CCNA_01924	0.71	-1.5
2,070,611	-		CCNA_01924	0.72	-0.7
2,070,624	-		CCNA_01924	0.73	+0.3
2,070,624	-		CCNA_01924	0.73	-0.6
2,070,634	-		CCNA_01924	0.74	-0.5
2,070,707	-		CCNA_01924	0.80	+0.3
2,070,707	-		CCNA_01924	0.80	-0.1
2,070,829	+				+1.2
2,070,837	-				-2.3
2,070,837	-				-0.8
2,070,839	+				+0.3
2,070,849	+				-0.7
2,070,880	-				-0.0
2,070,932	+				+0.0
2,070,932	+				-1.4
2,070,932	+				+0.6
2,070,932	+				+2.6
2,070,940	-				+2.6
2,070,940	-				-0.3
2,070,950	-				-1.1
2,070,981	-				-0.2
2,070,981	-				+0.7
2,071,015	-				-0.6
2,071,017	+				+1.0
2,071,050	-				+0.4
2,071,080	-				-0.1
2,071,080	-				-0.0
2,071,080	-				+0.3
2,071,080	-				+1.0
2,071,141	-		CCNA_01925	0.12	-0.4
2,071,141	-		CCNA_01925	0.12	+0.0
2,071,166	-		CCNA_01925	0.14	-0.8
2,071,166	-		CCNA_01925	0.14	+0.0
2,071,166	-		CCNA_01925	0.14	-0.9
2,071,166	-		CCNA_01925	0.14	-0.9
2,071,252	+		CCNA_01925	0.19	+0.3
2,071,252	+		CCNA_01925	0.19	-0.5
2,071,254	-		CCNA_01925	0.20	-0.5
2,071,254	-		CCNA_01925	0.20	-0.3
2,071,254	-		CCNA_01925	0.20	-1.2
2,071,283	-		CCNA_01925	0.22	-0.9
2,071,305	+		CCNA_01925	0.23	-0.5
2,071,314	+		CCNA_01925	0.24	+0.3
2,071,320	-		CCNA_01925	0.24	+1.0
2,071,320	-		CCNA_01925	0.24	+0.6
2,071,320	-		CCNA_01925	0.24	+0.6
2,071,320	-		CCNA_01925	0.24	+0.3
2,071,321	+		CCNA_01925	0.24	+1.8
2,071,334	+		CCNA_01925	0.25	+1.6
2,071,334	+		CCNA_01925	0.25	-0.2
2,071,342	-		CCNA_01925	0.26	-1.1
2,071,350	-				+1.0
2,071,372	-		CCNA_01925	0.28	-1.1
2,071,388	+		CCNA_01925	0.29	+1.0
2,071,457	-		CCNA_01925	0.33	-1.0
2,071,476	-		CCNA_01925	0.35	-1.2
2,071,476	-		CCNA_01925	0.35	-2.3
2,071,476	-		CCNA_01925	0.35	+0.6
2,071,476	-		CCNA_01925	0.35	-0.2
2,071,503	-		CCNA_01925	0.37	-0.3
2,071,503	-		CCNA_01925	0.37	+1.6
2,071,510	+		CCNA_01925	0.37	-2.4
2,071,539	-		CCNA_01925	0.39	+1.0
2,071,581	+		CCNA_01925	0.42	+0.6
2,071,589	-		CCNA_01925	0.43	+1.4
2,071,628	+		CCNA_01925	0.45	-1.0
2,071,631	-		CCNA_01925	0.45	+0.6
2,071,636	-		CCNA_01925	0.46	+0.6
2,071,636	-		CCNA_01925	0.46	-1.4
2,071,643	-		CCNA_01925	0.46	-2.0
2,071,645	+		CCNA_01925	0.46	-0.4
2,071,650	+		CCNA_01925	0.47	-1.3
2,071,650	+		CCNA_01925	0.47	+0.3
2,071,653	-		CCNA_01925	0.47	+2.6
2,071,662	+		CCNA_01925	0.48	-0.1
2,071,706	+		CCNA_01925	0.51	-1.5
2,071,732	-		CCNA_01925	0.52	+0.3
2,071,748	+		CCNA_01925	0.53	-0.2
2,071,756	-		CCNA_01925	0.54	-1.8
2,071,756	-		CCNA_01925	0.54	-1.1
2,071,763	+		CCNA_01925	0.54	+0.8
2,071,770	+		CCNA_01925	0.55	+0.3
2,071,824	+		CCNA_01925	0.59	+1.6
2,071,826	-		CCNA_01925	0.59	+0.3
2,071,849	+		CCNA_01925	0.60	-0.5
2,071,854	+		CCNA_01925	0.61	-1.2
2,071,910	+		CCNA_01925	0.65	-1.1
2,071,924	+		CCNA_01925	0.66	+1.6
2,071,963	+		CCNA_01925	0.68	+0.3
2,071,963	+		CCNA_01925	0.68	-1.1
2,071,971	-		CCNA_01925	0.69	+1.2
2,071,971	-		CCNA_01925	0.69	-0.7
2,071,992	+		CCNA_01925	0.70	-1.0
2,071,999	+		CCNA_01925	0.71	+1.0
2,072,009	+		CCNA_01925	0.71	-1.4
2,072,015	+		CCNA_01925	0.72	-1.5
2,072,024	-		CCNA_01925	0.72	+0.5
2,072,062	+		CCNA_01925	0.75	-0.5
2,072,070	-		CCNA_01925	0.76	-0.4
2,072,070	-		CCNA_01925	0.76	+1.6
2,072,073	+		CCNA_01925	0.76	+2.6
2,072,100	-		CCNA_01925	0.78	-1.3
2,072,122	+		CCNA_01925	0.79	-0.2
2,072,122	+		CCNA_01925	0.79	-0.2
2,072,122	+		CCNA_01925	0.79	+1.0
2,072,130	-		CCNA_01925	0.80	-1.0
2,072,201	-		CCNA_01925	0.84	-0.2
2,072,268	-		CCNA_01925	0.89	-1.1
2,072,336	-				-0.4
2,072,374	+				-1.5
2,072,399	-				-2.6
2,072,422	+				+0.2
2,072,430	-				-1.4
2,072,557	-				+1.6
2,072,557	-				+2.0
2,072,594	+				+0.7
2,072,614	+				-0.2
2,072,648	+				-0.1
2,072,648	+				+0.9
2,072,656	-				-0.5
2,072,656	-				+3.6
2,072,656	-				-0.4
2,072,656	-				+0.6
2,072,671	-				+2.6
2,072,742	+		CCNA_01926	0.11	+0.6
2,072,742	+		CCNA_01926	0.11	+1.6
2,072,742	+		CCNA_01926	0.11	-0.2
2,072,750	-		CCNA_01926	0.12	+1.6
2,072,750	-		CCNA_01926	0.12	+3.0
2,072,750	-		CCNA_01926	0.12	-1.2
2,072,762	+		CCNA_01926	0.13	-0.5
2,072,828	-		CCNA_01926	0.20	+2.6
2,072,898	+		CCNA_01926	0.26	+1.0
2,072,931	+		CCNA_01926	0.29	+0.5
2,072,946	-		CCNA_01926	0.31	-0.9
2,072,968	+		CCNA_01926	0.33	+0.7
2,072,991	+		CCNA_01926	0.35	-1.3
2,073,133	+		CCNA_01926	0.48	+0.2
2,073,141	-		CCNA_01926	0.49	-0.9
2,073,141	-		CCNA_01926	0.49	-0.7
2,073,145	+		CCNA_01926	0.49	+0.7
2,073,204	-		CCNA_01926	0.55	+2.6
2,073,282	+		CCNA_01926	0.62	+0.5
2,073,282	+		CCNA_01926	0.62	+0.7
2,073,290	-		CCNA_01926	0.63	-0.5
2,073,349	+		CCNA_01926	0.69	+0.5
2,073,349	+		CCNA_01926	0.69	+0.8
2,073,357	-		CCNA_01926	0.69	+1.0
2,073,413	-		CCNA_01926	0.75	-0.6