Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26585 and BWI76_RS26590 are separated by 87 nucleotides BWI76_RS26590 and BWI76_RS26595 are separated by 231 nucleotides
BWI76_RS26585: BWI76_RS26585 - MFS transporter, at 5,503,083 to 5,504,555
_RS26585
BWI76_RS26590: BWI76_RS26590 - transcriptional regulator, at 5,504,643 to 5,505,146
_RS26590
BWI76_RS26595: BWI76_RS26595 - FAD-dependent oxidoreductase, at 5,505,378 to 5,506,577
_RS26595
Position (kb) 5504
5505
5506 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5503.692 kb on - strand, within BWI76_RS26585 at 5503.759 kb on - strand, within BWI76_RS26585 at 5503.894 kb on + strand, within BWI76_RS26585 at 5503.902 kb on - strand, within BWI76_RS26585 at 5503.924 kb on + strand, within BWI76_RS26585 at 5503.930 kb on - strand, within BWI76_RS26585 at 5504.044 kb on + strand, within BWI76_RS26585 at 5504.076 kb on + strand, within BWI76_RS26585 at 5504.078 kb on + strand, within BWI76_RS26585 at 5504.099 kb on + strand, within BWI76_RS26585 at 5504.106 kb on + strand, within BWI76_RS26585 at 5504.234 kb on + strand, within BWI76_RS26585 at 5504.251 kb on - strand, within BWI76_RS26585 at 5504.320 kb on - strand, within BWI76_RS26585 at 5504.583 kb on - strand at 5504.670 kb on - strand at 5504.741 kb on + strand, within BWI76_RS26590 at 5504.915 kb on + strand, within BWI76_RS26590 at 5504.930 kb on - strand, within BWI76_RS26590 at 5505.143 kb on - strand at 5505.380 kb on - strand at 5505.429 kb on + strand at 5505.437 kb on - strand at 5505.483 kb on - strand at 5505.499 kb on - strand, within BWI76_RS26595 at 5505.504 kb on - strand, within BWI76_RS26595 at 5505.628 kb on + strand, within BWI76_RS26595 at 5505.628 kb on + strand, within BWI76_RS26595 at 5505.984 kb on + strand, within BWI76_RS26595 at 5506.066 kb on + strand, within BWI76_RS26595 at 5506.074 kb on - strand, within BWI76_RS26595
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 5,503,692 - BWI76_RS26585 0.41 -1.9 5,503,759 - BWI76_RS26585 0.46 +0.7 5,503,894 + BWI76_RS26585 0.55 +0.2 5,503,902 - BWI76_RS26585 0.56 +0.1 5,503,924 + BWI76_RS26585 0.57 -0.6 5,503,930 - BWI76_RS26585 0.58 +0.1 5,504,044 + BWI76_RS26585 0.65 +0.0 5,504,076 + BWI76_RS26585 0.67 -0.2 5,504,078 + BWI76_RS26585 0.68 -2.0 5,504,099 + BWI76_RS26585 0.69 -1.1 5,504,106 + BWI76_RS26585 0.69 +0.1 5,504,234 + BWI76_RS26585 0.78 -0.0 5,504,251 - BWI76_RS26585 0.79 +0.4 5,504,320 - BWI76_RS26585 0.84 -0.9 5,504,583 - -0.8 5,504,670 - -0.2 5,504,741 + BWI76_RS26590 0.19 +0.1 5,504,915 + BWI76_RS26590 0.54 -0.3 5,504,930 - BWI76_RS26590 0.57 -0.2 5,505,143 - -0.0 5,505,380 - +0.0 5,505,429 + -2.8 5,505,437 - -0.3 5,505,483 - -1.9 5,505,499 - BWI76_RS26595 0.10 -0.2 5,505,504 - BWI76_RS26595 0.10 -0.4 5,505,628 + BWI76_RS26595 0.21 -1.5 5,505,628 + BWI76_RS26595 0.21 +1.9 5,505,984 + BWI76_RS26595 0.51 +0.2 5,506,066 + BWI76_RS26595 0.57 +1.4 5,506,074 - BWI76_RS26595 0.58 -2.2
Or see this region's nucleotide sequence