Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24915 and BWI76_RS24920 overlap by 43 nucleotides BWI76_RS24920 and BWI76_RS24925 are separated by 22 nucleotides BWI76_RS24925 and BWI76_RS24930 are separated by 9 nucleotides
BWI76_RS24915: BWI76_RS24915 - penicillin-binding protein activator, at 5,191,438 to 5,193,519
_RS24915
BWI76_RS24920: BWI76_RS24920 - YraN family protein, at 5,193,477 to 5,193,863
_RS24920
BWI76_RS24925: BWI76_RS24925 - DnaA initiator-associating protein DiaA, at 5,193,886 to 5,194,476
_RS24925
BWI76_RS24930: BWI76_RS24930 - osmotically-inducible protein OsmY, at 5,194,486 to 5,195,061
_RS24930
Position (kb) 5193
5194 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5192.563 kb on - strand, within BWI76_RS24915 at 5192.681 kb on - strand, within BWI76_RS24915 at 5192.703 kb on + strand, within BWI76_RS24915 at 5192.833 kb on + strand, within BWI76_RS24915 at 5193.028 kb on + strand, within BWI76_RS24915 at 5193.028 kb on + strand, within BWI76_RS24915 at 5193.028 kb on + strand, within BWI76_RS24915 at 5193.036 kb on - strand, within BWI76_RS24915 at 5193.040 kb on + strand, within BWI76_RS24915 at 5193.040 kb on + strand, within BWI76_RS24915 at 5193.041 kb on - strand, within BWI76_RS24915 at 5193.048 kb on - strand, within BWI76_RS24915 at 5193.158 kb on - strand, within BWI76_RS24915 at 5193.170 kb on + strand, within BWI76_RS24915 at 5193.170 kb on + strand, within BWI76_RS24915 at 5193.172 kb on + strand, within BWI76_RS24915 at 5193.207 kb on - strand, within BWI76_RS24915 at 5193.323 kb on + strand at 5193.408 kb on - strand at 5193.412 kb on + strand at 5193.445 kb on + strand at 5193.636 kb on + strand, within BWI76_RS24920 at 5193.745 kb on - strand, within BWI76_RS24920 at 5193.807 kb on + strand, within BWI76_RS24920 at 5194.007 kb on - strand, within BWI76_RS24925 at 5194.186 kb on + strand, within BWI76_RS24925 at 5194.314 kb on - strand, within BWI76_RS24925 at 5194.493 kb on - strand at 5194.610 kb on + strand, within BWI76_RS24930 at 5194.610 kb on + strand, within BWI76_RS24930 at 5194.722 kb on - strand, within BWI76_RS24930 at 5194.745 kb on - strand, within BWI76_RS24930 at 5194.847 kb on - strand, within BWI76_RS24930
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 5,192,563 - BWI76_RS24915 0.54 -0.1 5,192,681 - BWI76_RS24915 0.60 +0.2 5,192,703 + BWI76_RS24915 0.61 -2.8 5,192,833 + BWI76_RS24915 0.67 +0.6 5,193,028 + BWI76_RS24915 0.76 +0.5 5,193,028 + BWI76_RS24915 0.76 -0.5 5,193,028 + BWI76_RS24915 0.76 +0.3 5,193,036 - BWI76_RS24915 0.77 -0.2 5,193,040 + BWI76_RS24915 0.77 +0.6 5,193,040 + BWI76_RS24915 0.77 -1.3 5,193,041 - BWI76_RS24915 0.77 +1.3 5,193,048 - BWI76_RS24915 0.77 +0.2 5,193,158 - BWI76_RS24915 0.83 -0.2 5,193,170 + BWI76_RS24915 0.83 +0.1 5,193,170 + BWI76_RS24915 0.83 -1.0 5,193,172 + BWI76_RS24915 0.83 +0.1 5,193,207 - BWI76_RS24915 0.85 -3.2 5,193,323 + -0.8 5,193,408 - -1.0 5,193,412 + +0.7 5,193,445 + +1.7 5,193,636 + BWI76_RS24920 0.41 +1.0 5,193,745 - BWI76_RS24920 0.69 +1.2 5,193,807 + BWI76_RS24920 0.85 -0.0 5,194,007 - BWI76_RS24925 0.20 -1.8 5,194,186 + BWI76_RS24925 0.51 -2.7 5,194,314 - BWI76_RS24925 0.72 -0.3 5,194,493 - -1.0 5,194,610 + BWI76_RS24930 0.22 -0.5 5,194,610 + BWI76_RS24930 0.22 -0.3 5,194,722 - BWI76_RS24930 0.41 +1.1 5,194,745 - BWI76_RS24930 0.45 -0.1 5,194,847 - BWI76_RS24930 0.63 -1.0
Or see this region's nucleotide sequence