Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07825 and BWI76_RS07830 are separated by 46 nucleotides BWI76_RS07830 and BWI76_RS07835 are separated by 25 nucleotides
BWI76_RS07825: BWI76_RS07825 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,659,246 to 1,660,274
_RS07825
BWI76_RS07830: BWI76_RS07830 - 3-phytase, at 1,660,321 to 1,661,589
_RS07830
BWI76_RS07835: BWI76_RS07835 - MFS transporter, at 1,661,615 to 1,662,976
_RS07835
Position (kb)
1660
1661
1662 Strain fitness (log2 ratio)
-2
-1
0
1 at 1659.344 kb on + strand at 1659.450 kb on + strand, within BWI76_RS07825 at 1659.536 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.885 kb on - strand, within BWI76_RS07825 at 1659.920 kb on - strand, within BWI76_RS07825 at 1660.053 kb on - strand, within BWI76_RS07825 at 1660.136 kb on - strand, within BWI76_RS07825 at 1660.206 kb on + strand at 1660.236 kb on - strand at 1660.238 kb on + strand at 1660.408 kb on - strand at 1660.733 kb on + strand, within BWI76_RS07830 at 1661.173 kb on - strand, within BWI76_RS07830 at 1661.307 kb on + strand, within BWI76_RS07830 at 1661.515 kb on + strand at 1661.606 kb on + strand at 1662.003 kb on + strand, within BWI76_RS07835 at 1662.003 kb on + strand, within BWI76_RS07835 at 1662.013 kb on - strand, within BWI76_RS07835 at 1662.147 kb on + strand, within BWI76_RS07835
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 1,659,344 + +0.5 1,659,450 + BWI76_RS07825 0.20 -0.1 1,659,536 - BWI76_RS07825 0.28 -2.2 1,659,831 - BWI76_RS07825 0.57 +0.1 1,659,831 - BWI76_RS07825 0.57 +0.4 1,659,831 - BWI76_RS07825 0.57 -0.2 1,659,885 - BWI76_RS07825 0.62 -0.2 1,659,920 - BWI76_RS07825 0.66 +0.9 1,660,053 - BWI76_RS07825 0.78 -2.6 1,660,136 - BWI76_RS07825 0.86 -0.2 1,660,206 + -0.1 1,660,236 - +1.0 1,660,238 + +0.4 1,660,408 - +0.3 1,660,733 + BWI76_RS07830 0.32 -0.5 1,661,173 - BWI76_RS07830 0.67 -2.6 1,661,307 + BWI76_RS07830 0.78 -0.4 1,661,515 + -1.0 1,661,606 + +0.6 1,662,003 + BWI76_RS07835 0.28 -0.0 1,662,003 + BWI76_RS07835 0.28 +0.4 1,662,013 - BWI76_RS07835 0.29 -0.3 1,662,147 + BWI76_RS07835 0.39 +0.3
Or see this region's nucleotide sequence