Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07210

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
1,516,425	+		BWI76_RS07205	0.55	+0.7
1,516,476	+		BWI76_RS07205	0.59	-0.5
1,516,488	+		BWI76_RS07205	0.59	+0.4
1,516,518	+		BWI76_RS07205	0.61	+1.4
1,516,615	+		BWI76_RS07205	0.68	-0.3
1,516,684	+		BWI76_RS07205	0.72	+1.3
1,516,685	-		BWI76_RS07205	0.72	+1.5
1,516,749	-		BWI76_RS07205	0.77	-1.4
1,516,870	-		BWI76_RS07205	0.85	-0.9
1,516,893	+		BWI76_RS07205	0.86	+0.3
1,516,950	+		BWI76_RS07205	0.90	-0.3
1,516,963	+				+1.1
1,516,971	-				+1.0
1,516,988	-				+1.2
1,517,005	+				-0.8
1,517,024	+				-0.2
1,517,024	+				+0.1
1,517,030	+				+1.0
1,517,057	-				-1.2
1,517,057	-				-1.0
1,517,057	-				+0.3
1,517,058	-				+0.2
1,517,066	+				-1.3
1,517,066	+				-0.1
1,517,066	+				-1.0
1,517,066	+				-3.2
1,517,066	+				-0.4
1,517,066	+				-1.5
1,517,066	+				-0.3
1,517,066	+				-0.9
1,517,066	+				-0.3
1,517,066	+				+0.9
1,517,066	+				-0.2
1,517,066	+				-0.3
1,517,066	+				-1.0
1,517,074	-				-0.0
1,517,074	-				+1.0
1,517,074	-				-0.0
1,517,074	-				-0.6
1,517,074	-				-0.6
1,517,076	+				+0.6
1,517,076	+				-1.0
1,517,076	-				+1.0
1,517,079	-				-0.6
1,517,114	+				-0.7
1,517,122	-				-0.6
1,517,122	-				-1.5
1,517,159	+				+2.5
1,517,167	-				-0.4
1,517,174	+				-1.2
1,517,182	-				-2.0
1,517,189	+				-1.2
1,517,189	+				+2.5
1,517,189	+				-1.1
1,517,189	+				-1.8
1,517,189	+				+1.2
1,517,189	+				-1.2
1,517,189	+				+0.5
1,517,189	+				+2.5
1,517,189	+				-1.9
1,517,197	-				+0.8
1,517,197	-				-2.5
1,517,197	-				-0.6
1,517,197	-				+0.5
1,517,197	-				+1.7
1,517,197	-				-1.5
1,517,197	-				-0.1
1,517,197	-				-2.2
1,517,197	-				-0.5
1,517,197	-				+0.5
1,517,197	-				+1.2
1,517,198	-				+0.1
1,517,202	+				+1.1
1,517,202	-				+0.9
1,517,204	+				+0.0
1,517,204	+				-1.6
1,517,204	+				-0.9
1,517,204	+				+0.3
1,517,204	+				+2.0
1,517,204	+				+1.4
1,517,210	-				-1.9
1,517,211	+				-1.1
1,517,211	+				+1.2
1,517,211	+				+0.3
1,517,212	+				-0.6
1,517,212	+				-2.3
1,517,212	+				-0.4
1,517,212	+				-1.3
1,517,212	+				-1.9
1,517,212	+				-1.0
1,517,212	+				+0.8
1,517,212	+				-3.0
1,517,212	+				+0.7
1,517,212	+				+0.4
1,517,212	+				+2.5
1,517,212	+				-0.3
1,517,212	-				-0.0
1,517,212	-				+0.6
1,517,212	-				-0.3
1,517,212	-				+1.5
1,517,212	-				+0.7
1,517,212	-				+0.2
1,517,212	-				-0.2
1,517,212	-				+0.3
1,517,213	+				+0.5
1,517,213	+				-3.7
1,517,213	-				-0.5
1,517,219	-				+1.0
1,517,219	-				-0.5
1,517,219	-				-2.5
1,517,219	-				+1.0
1,517,219	-				+0.9
1,517,219	-				-1.9
1,517,219	-				+1.5
1,517,219	-				+0.6
1,517,219	-				-0.5
1,517,219	-				+0.2
1,517,219	-				+0.6
1,517,219	-				-0.8
1,517,219	-				-1.2
1,517,219	-				-0.0
1,517,219	-				-0.6
1,517,219	-				-0.0
1,517,219	-				+1.3
1,517,219	-				-1.3
1,517,219	-				-0.3
1,517,219	-				-2.2
1,517,219	-				-0.8
1,517,219	-				-2.8
1,517,221	-				-0.9
1,517,249	-				+1.2
1,517,279	+				-3.1
1,517,287	-				-0.0
1,517,320	-		BWI76_RS07210	0.16	+0.3
1,517,349	-		BWI76_RS07210	0.23	+0.1
1,517,349	-		BWI76_RS07210	0.23	-1.6
1,517,349	-		BWI76_RS07210	0.23	-2.3
1,517,411	+		BWI76_RS07210	0.38	+0.3
1,517,411	+		BWI76_RS07210	0.38	-1.7
1,517,411	+		BWI76_RS07210	0.38	+0.5
1,517,411	-		BWI76_RS07210	0.38	-0.7
1,517,411	-		BWI76_RS07210	0.38	+0.5
1,517,411	-		BWI76_RS07210	0.38	-0.3
1,517,418	+		BWI76_RS07210	0.40	+0.2
1,517,418	+		BWI76_RS07210	0.40	-0.8
1,517,418	+		BWI76_RS07210	0.40	+1.0
1,517,418	+				+3.1
1,517,418	+		BWI76_RS07210	0.40	+0.5
1,517,418	+		BWI76_RS07210	0.40	-0.4
1,517,418	+		BWI76_RS07210	0.40	+1.1
1,517,418	+		BWI76_RS07210	0.40	-2.2
1,517,419	-		BWI76_RS07210	0.40	-0.8
1,517,419	-		BWI76_RS07210	0.40	-1.8
1,517,419	-		BWI76_RS07210	0.40	-0.9
1,517,426	-		BWI76_RS07210	0.42	-0.0
1,517,426	-		BWI76_RS07210	0.42	-1.2
1,517,426	-		BWI76_RS07210	0.42	-3.0
1,517,426	-		BWI76_RS07210	0.42	+2.0
1,517,427	-				+0.5
1,517,431	+		BWI76_RS07210	0.43	-0.5
1,517,431	+		BWI76_RS07210	0.43	-0.8
1,517,431	+		BWI76_RS07210	0.43	-0.1
1,517,439	-		BWI76_RS07210	0.45	-3.6
1,517,439	-		BWI76_RS07210	0.45	-1.6
1,517,439	-		BWI76_RS07210	0.45	+0.1
1,517,446	+		BWI76_RS07210	0.47	+0.7
1,517,450	+		BWI76_RS07210	0.48	+0.4
1,517,450	+		BWI76_RS07210	0.48	+0.4
1,517,450	+		BWI76_RS07210	0.48	+0.5
1,517,450	+		BWI76_RS07210	0.48	-0.1
1,517,454	-		BWI76_RS07210	0.49	+0.5
1,517,459	+		BWI76_RS07210	0.50	+1.2
1,517,459	+		BWI76_RS07210	0.50	-3.4
1,517,467	-		BWI76_RS07210	0.52	+1.1
1,517,467	-		BWI76_RS07210	0.52	-0.3
1,517,469	+		BWI76_RS07210	0.52	-0.1
1,517,469	+		BWI76_RS07210	0.52	-0.3
1,517,477	-		BWI76_RS07210	0.54	+0.3
1,517,477	-		BWI76_RS07210	0.54	+0.7
1,517,477	-		BWI76_RS07210	0.54	+0.3
1,517,495	-		BWI76_RS07210	0.59	+0.2
1,517,509	-		BWI76_RS07210	0.62	-0.3
1,517,557	+		BWI76_RS07210	0.74	-0.2
1,517,557	+		BWI76_RS07210	0.74	-0.8
1,517,557	+		BWI76_RS07210	0.74	+0.5
1,517,565	-		BWI76_RS07210	0.76	-1.0
1,517,565	-		BWI76_RS07210	0.76	+1.0
1,517,589	+		BWI76_RS07210	0.81	-0.9
1,517,602	-		BWI76_RS07210	0.85	-0.0
1,517,623	-		BWI76_RS07210	0.90	-0.6
1,517,629	-				+0.2
1,517,661	+				+0.8
1,517,682	+				+1.8
1,517,690	-				-1.3
1,517,705	+				+0.5
1,517,710	+				+1.1
1,517,796	+				-1.5
1,517,796	-				-0.9
1,517,796	-				-1.9
1,517,804	-				+0.2
1,517,886	-				-1.2
1,517,889	+				+0.5
1,518,009	+		BWI76_RS07215	0.22	+1.4
1,518,148	-		BWI76_RS07215	0.38	+1.9
1,518,170	-		BWI76_RS07215	0.41	-0.5
1,518,172	+		BWI76_RS07215	0.41	+0.5
1,518,172	+		BWI76_RS07215	0.41	+0.9
1,518,220	+		BWI76_RS07215	0.46	+0.1
1,518,223	-		BWI76_RS07215	0.47	-1.0
1,518,225	+		BWI76_RS07215	0.47	+0.7
1,518,316	+		BWI76_RS07215	0.57	+1.0
1,518,319	-		BWI76_RS07215	0.58	+0.4
1,518,335	-		BWI76_RS07215	0.59	-0.5
1,518,444	-		BWI76_RS07215	0.72	-0.1
1,518,478	-		BWI76_RS07215	0.76	+0.1
1,518,532	+		BWI76_RS07215	0.82	-3.9
1,518,535	-		BWI76_RS07215	0.82	+0.8
1,518,535	-		BWI76_RS07215	0.82	+2.5
1,518,540	-		BWI76_RS07215	0.83	+0.4
1,518,597	+				+1.5