Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03375

Experiment: Cytosine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS03370 and BWI76_RS03375 are separated by 114 nucleotidesBWI76_RS03375 and BWI76_RS03380 are separated by 179 nucleotides BWI76_RS03370: BWI76_RS03370 - type I restriction-modification system subunit S, at 694,751 to 696,202 _RS03370 BWI76_RS03375: BWI76_RS03375 - transcriptional regulator, at 696,317 to 696,595 _RS03375 BWI76_RS03380: BWI76_RS03380 - hypothetical protein, at 696,775 to 697,692 _RS03380 Position (kb) 696 697Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.321 kb on + strand, within BWI76_RS03370at 695.327 kb on - strand, within BWI76_RS03370at 695.354 kb on + strand, within BWI76_RS03370at 695.355 kb on - strand, within BWI76_RS03370at 695.355 kb on - strand, within BWI76_RS03370at 695.361 kb on + strand, within BWI76_RS03370at 695.407 kb on - strand, within BWI76_RS03370at 695.409 kb on - strand, within BWI76_RS03370at 695.412 kb on + strand, within BWI76_RS03370at 695.412 kb on + strand, within BWI76_RS03370at 695.420 kb on - strand, within BWI76_RS03370at 695.420 kb on - strand, within BWI76_RS03370at 695.420 kb on - strand, within BWI76_RS03370at 695.420 kb on - strand, within BWI76_RS03370at 695.420 kb on - strand, within BWI76_RS03370at 695.420 kb on - strand, within BWI76_RS03370at 695.432 kb on - strand, within BWI76_RS03370at 695.442 kb on - strand, within BWI76_RS03370at 695.447 kb on - strand, within BWI76_RS03370at 695.449 kb on + strand, within BWI76_RS03370at 695.450 kb on + strand, within BWI76_RS03370at 695.479 kb on - strand, within BWI76_RS03370at 695.499 kb on + strand, within BWI76_RS03370at 695.511 kb on - strand, within BWI76_RS03370at 695.539 kb on - strand, within BWI76_RS03370at 695.593 kb on - strand, within BWI76_RS03370at 695.679 kb on + strand, within BWI76_RS03370at 695.734 kb on + strand, within BWI76_RS03370at 695.772 kb on - strand, within BWI76_RS03370at 695.918 kb on + strand, within BWI76_RS03370at 696.084 kb on + strandat 696.084 kb on + strandat 696.084 kb on + strandat 696.084 kb on + strandat 696.091 kb on + strandat 696.092 kb on - strandat 696.096 kb on + strandat 696.098 kb on + strandat 696.098 kb on + strandat 696.098 kb on + strandat 696.098 kb on + strandat 696.098 kb on + strandat 696.127 kb on + strandat 696.195 kb on + strandat 696.372 kb on - strand, within BWI76_RS03375at 696.372 kb on - strand, within BWI76_RS03375at 696.372 kb on - strand, within BWI76_RS03375at 696.372 kb on - strand, within BWI76_RS03375at 696.372 kb on - strand, within BWI76_RS03375at 696.372 kb on - strand, within BWI76_RS03375at 696.422 kb on + strand, within BWI76_RS03375at 696.422 kb on + strand, within BWI76_RS03375at 696.422 kb on + strandat 696.423 kb on + strand, within BWI76_RS03375at 696.423 kb on + strand, within BWI76_RS03375at 696.423 kb on + strand, within BWI76_RS03375at 696.423 kb on + strand, within BWI76_RS03375at 696.430 kb on - strand, within BWI76_RS03375at 696.430 kb on - strand, within BWI76_RS03375at 696.430 kb on - strand, within BWI76_RS03375at 696.430 kb on - strand, within BWI76_RS03375at 696.430 kb on - strand, within BWI76_RS03375at 696.430 kb on - strand, within BWI76_RS03375at 696.431 kb on - strand, within BWI76_RS03375at 696.431 kb on - strand, within BWI76_RS03375at 696.431 kb on - strand, within BWI76_RS03375at 696.431 kb on - strand, within BWI76_RS03375at 696.431 kb on - strand, within BWI76_RS03375at 696.431 kb on - strand, within BWI76_RS03375at 696.448 kb on - strand, within BWI76_RS03375at 696.456 kb on + strand, within BWI76_RS03375at 696.458 kb on - strand, within BWI76_RS03375at 696.492 kb on + strand, within BWI76_RS03375at 696.492 kb on + strand, within BWI76_RS03375at 696.492 kb on + strand, within BWI76_RS03375at 696.493 kb on + strand, within BWI76_RS03375at 696.500 kb on - strand, within BWI76_RS03375at 696.500 kb on - strand, within BWI76_RS03375at 696.500 kb on - strand, within BWI76_RS03375at 696.500 kb on - strand, within BWI76_RS03375at 696.500 kb on - strand, within BWI76_RS03375at 696.501 kb on - strand, within BWI76_RS03375at 696.511 kb on - strand, within BWI76_RS03375at 696.514 kb on + strand, within BWI76_RS03375at 696.514 kb on + strand, within BWI76_RS03375at 696.514 kb on + strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.522 kb on - strand, within BWI76_RS03375at 696.527 kb on - strand, within BWI76_RS03375at 696.545 kb on - strand, within BWI76_RS03375at 696.573 kb on + strandat 696.581 kb on - strandat 696.600 kb on - strandat 696.615 kb on + strandat 696.678 kb on - strandat 696.682 kb on + strandat 696.690 kb on - strandat 696.720 kb on + strandat 696.720 kb on + strandat 696.720 kb on + strandat 696.741 kb on + strandat 696.741 kb on + strandat 696.769 kb on + strandat 696.771 kb on + strandat 696.811 kb on + strandat 696.832 kb on - strandat 696.887 kb on + strand, within BWI76_RS03380at 696.887 kb on + strand, within BWI76_RS03380at 696.900 kb on + strand, within BWI76_RS03380at 696.900 kb on + strand, within BWI76_RS03380at 696.900 kb on + strand, within BWI76_RS03380at 696.900 kb on + strand, within BWI76_RS03380at 696.900 kb on + strand, within BWI76_RS03380at 696.908 kb on - strand, within BWI76_RS03380at 696.908 kb on - strand, within BWI76_RS03380at 696.908 kb on - strand, within BWI76_RS03380at 696.908 kb on - strand, within BWI76_RS03380at 696.921 kb on - strand, within BWI76_RS03380at 696.929 kb on + strand, within BWI76_RS03380at 696.931 kb on + strand, within BWI76_RS03380at 696.938 kb on + strand, within BWI76_RS03380at 696.938 kb on - strand, within BWI76_RS03380at 696.939 kb on - strand, within BWI76_RS03380at 697.012 kb on + strand, within BWI76_RS03380at 697.020 kb on - strand, within BWI76_RS03380at 697.039 kb on - strand, within BWI76_RS03380at 697.052 kb on - strand, within BWI76_RS03380at 697.088 kb on - strand, within BWI76_RS03380at 697.095 kb on - strand, within BWI76_RS03380at 697.254 kb on + strand, within BWI76_RS03380at 697.531 kb on + strand, within BWI76_RS03380at 697.531 kb on + strand, within BWI76_RS03380at 697.539 kb on - strand, within BWI76_RS03380at 697.539 kb on - strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.541 kb on + strand, within BWI76_RS03380at 697.542 kb on + strand, within BWI76_RS03380at 697.549 kb on + strand, within BWI76_RS03380at 697.549 kb on - strand, within BWI76_RS03380

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Cytosine (N)
remove
695,321 + BWI76_RS03370 0.39 -1.5
695,321 + BWI76_RS03370 0.39 -0.1
695,321 + BWI76_RS03370 0.39 -1.5
695,321 + BWI76_RS03370 0.39 -0.9
695,321 + BWI76_RS03370 0.39 -0.4
695,321 + BWI76_RS03370 0.39 -0.2
695,321 + BWI76_RS03370 0.39 -0.2
695,321 + BWI76_RS03370 0.39 -0.0
695,321 + BWI76_RS03370 0.39 -0.0
695,321 + BWI76_RS03370 0.39 -2.2
695,321 + BWI76_RS03370 0.39 -1.2
695,321 + BWI76_RS03370 0.39 +0.2
695,321 + BWI76_RS03370 0.39 -0.4
695,321 + BWI76_RS03370 0.39 -1.2
695,321 + BWI76_RS03370 0.39 +0.8
695,321 + BWI76_RS03370 0.39 +0.1
695,321 + BWI76_RS03370 0.39 +1.7
695,321 + BWI76_RS03370 0.39 -0.3
695,321 + BWI76_RS03370 0.39 +0.8
695,321 + BWI76_RS03370 0.39 -1.4
695,321 + BWI76_RS03370 0.39 -2.2
695,321 + BWI76_RS03370 0.39 -0.5
695,321 + BWI76_RS03370 0.39 -0.4
695,321 + BWI76_RS03370 0.39 +0.1
695,321 + BWI76_RS03370 0.39 +0.9
695,327 - BWI76_RS03370 0.40 +0.0
695,354 + BWI76_RS03370 0.42 +0.3
695,355 - BWI76_RS03370 0.42 -0.7
695,355 - BWI76_RS03370 0.42 -2.9
695,361 + BWI76_RS03370 0.42 -0.6
695,407 - BWI76_RS03370 0.45 +0.3
695,409 - BWI76_RS03370 0.45 -1.3
695,412 + BWI76_RS03370 0.46 -0.2
695,412 + BWI76_RS03370 0.46 +0.6
695,420 - BWI76_RS03370 0.46 -0.9
695,420 - BWI76_RS03370 0.46 -3.1
695,420 - BWI76_RS03370 0.46 +0.0
695,420 - BWI76_RS03370 0.46 +0.6
695,420 - BWI76_RS03370 0.46 -0.6
695,420 - BWI76_RS03370 0.46 +0.8
695,432 - BWI76_RS03370 0.47 +0.8
695,442 - BWI76_RS03370 0.48 -1.8
695,447 - BWI76_RS03370 0.48 -0.5
695,449 + BWI76_RS03370 0.48 +0.9
695,450 + BWI76_RS03370 0.48 -0.8
695,479 - BWI76_RS03370 0.50 +2.1
695,499 + BWI76_RS03370 0.52 -0.1
695,511 - BWI76_RS03370 0.52 -0.1
695,539 - BWI76_RS03370 0.54 -0.5
695,593 - BWI76_RS03370 0.58 -1.6
695,679 + BWI76_RS03370 0.64 +0.0
695,734 + BWI76_RS03370 0.68 -1.3
695,772 - BWI76_RS03370 0.70 +2.0
695,918 + BWI76_RS03370 0.80 -0.6
696,084 + +2.3
696,084 + +0.8
696,084 + +1.0
696,084 + -0.7
696,091 + -0.5
696,092 - +0.0
696,096 + +1.6
696,098 + -0.8
696,098 + -0.6
696,098 + -0.2
696,098 + -1.2
696,098 + -2.5
696,127 + -2.4
696,195 + -0.7
696,372 - BWI76_RS03375 0.20 -3.1
696,372 - BWI76_RS03375 0.20 -1.9
696,372 - BWI76_RS03375 0.20 +0.7
696,372 - BWI76_RS03375 0.20 -0.4
696,372 - BWI76_RS03375 0.20 -2.6
696,372 - BWI76_RS03375 0.20 +0.3
696,422 + BWI76_RS03375 0.38 -0.2
696,422 + BWI76_RS03375 0.38 -1.0
696,422 + +1.6
696,423 + BWI76_RS03375 0.38 +3.4
696,423 + BWI76_RS03375 0.38 -1.4
696,423 + BWI76_RS03375 0.38 -1.4
696,423 + BWI76_RS03375 0.38 +0.0
696,430 - BWI76_RS03375 0.41 -0.1
696,430 - BWI76_RS03375 0.41 +0.8
696,430 - BWI76_RS03375 0.41 -2.5
696,430 - BWI76_RS03375 0.41 +1.5
696,430 - BWI76_RS03375 0.41 -2.9
696,430 - BWI76_RS03375 0.41 +0.6
696,431 - BWI76_RS03375 0.41 -2.2
696,431 - BWI76_RS03375 0.41 -2.1
696,431 - BWI76_RS03375 0.41 -2.1
696,431 - BWI76_RS03375 0.41 +1.1
696,431 - BWI76_RS03375 0.41 -0.4
696,431 - BWI76_RS03375 0.41 -1.8
696,448 - BWI76_RS03375 0.47 -2.6
696,456 + BWI76_RS03375 0.50 -0.4
696,458 - BWI76_RS03375 0.51 -2.1
696,492 + BWI76_RS03375 0.63 +2.9
696,492 + BWI76_RS03375 0.63 +0.6
696,492 + BWI76_RS03375 0.63 -1.3
696,493 + BWI76_RS03375 0.63 -0.5
696,500 - BWI76_RS03375 0.66 -1.1
696,500 - BWI76_RS03375 0.66 +2.0
696,500 - BWI76_RS03375 0.66 +0.3
696,500 - BWI76_RS03375 0.66 -1.3
696,500 - BWI76_RS03375 0.66 -2.4
696,501 - BWI76_RS03375 0.66 +0.0
696,511 - BWI76_RS03375 0.70 -0.2
696,514 + BWI76_RS03375 0.71 +1.2
696,514 + BWI76_RS03375 0.71 -0.8
696,514 + BWI76_RS03375 0.71 -0.7
696,522 - BWI76_RS03375 0.73 -0.5
696,522 - BWI76_RS03375 0.73 -1.9
696,522 - BWI76_RS03375 0.73 +0.4
696,522 - BWI76_RS03375 0.73 -0.8
696,522 - BWI76_RS03375 0.73 -0.6
696,522 - BWI76_RS03375 0.73 +1.8
696,522 - BWI76_RS03375 0.73 -1.9
696,527 - BWI76_RS03375 0.75 -0.6
696,545 - BWI76_RS03375 0.82 +1.0
696,573 + +2.6
696,581 - -0.0
696,600 - +1.2
696,615 + -1.6
696,678 - -0.2
696,682 + -3.0
696,690 - +0.7
696,720 + -1.0
696,720 + -1.6
696,720 + +0.1
696,741 + -1.5
696,741 + +0.7
696,769 + -0.4
696,771 + +0.4
696,811 + -2.3
696,832 - +0.8
696,887 + BWI76_RS03380 0.12 +0.3
696,887 + BWI76_RS03380 0.12 -0.7
696,900 + BWI76_RS03380 0.14 -1.3
696,900 + BWI76_RS03380 0.14 -0.0
696,900 + BWI76_RS03380 0.14 +0.8
696,900 + BWI76_RS03380 0.14 +0.0
696,900 + BWI76_RS03380 0.14 -0.4
696,908 - BWI76_RS03380 0.14 -0.6
696,908 - BWI76_RS03380 0.14 -0.7
696,908 - BWI76_RS03380 0.14 +1.8
696,908 - BWI76_RS03380 0.14 +0.3
696,921 - BWI76_RS03380 0.16 -0.6
696,929 + BWI76_RS03380 0.17 +1.3
696,931 + BWI76_RS03380 0.17 -0.6
696,938 + BWI76_RS03380 0.18 +2.1
696,938 - BWI76_RS03380 0.18 -1.5
696,939 - BWI76_RS03380 0.18 -1.1
697,012 + BWI76_RS03380 0.26 +2.4
697,020 - BWI76_RS03380 0.27 +1.2
697,039 - BWI76_RS03380 0.29 +0.3
697,052 - BWI76_RS03380 0.30 -0.2
697,088 - BWI76_RS03380 0.34 +0.6
697,095 - BWI76_RS03380 0.35 +2.8
697,254 + BWI76_RS03380 0.52 -0.2
697,531 + BWI76_RS03380 0.82 +1.0
697,531 + BWI76_RS03380 0.82 -1.6
697,539 - BWI76_RS03380 0.83 -0.6
697,539 - BWI76_RS03380 0.83 -1.3
697,541 + BWI76_RS03380 0.83 +0.8
697,541 + BWI76_RS03380 0.83 +1.0
697,541 + BWI76_RS03380 0.83 -0.4
697,541 + BWI76_RS03380 0.83 -0.4
697,541 + BWI76_RS03380 0.83 -1.4
697,541 + BWI76_RS03380 0.83 +1.2
697,541 + BWI76_RS03380 0.83 -0.2
697,541 + BWI76_RS03380 0.83 -1.0
697,541 + BWI76_RS03380 0.83 -1.2
697,541 + BWI76_RS03380 0.83 -1.3
697,541 + BWI76_RS03380 0.83 -3.2
697,541 + BWI76_RS03380 0.83 +1.4
697,542 + BWI76_RS03380 0.84 +3.0
697,549 + BWI76_RS03380 0.84 -1.8
697,549 - BWI76_RS03380 0.84 -2.0

Or see this region's nucleotide sequence