Experiment: 60 mM Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2713 and DvMF_2714 are separated by 15 nucleotides DvMF_2714 and DvMF_2715 are separated by 483 nucleotides
DvMF_2713: DvMF_2713 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,434,744 to 3,436,714
_2713
DvMF_2714: DvMF_2714 - protein of unknown function DUF362 (RefSeq), at 3,436,730 to 3,437,710
_2714
DvMF_2715: DvMF_2715 - hypothetical protein (RefSeq), at 3,438,194 to 3,438,523
_2715
Position (kb)
3436
3437
3438 Strain fitness (log2 ratio)
-1
0
1
2 at 3435.845 kb on - strand, within DvMF_2713 at 3435.870 kb on + strand, within DvMF_2713 at 3435.880 kb on + strand, within DvMF_2713 at 3435.951 kb on + strand, within DvMF_2713 at 3436.136 kb on + strand, within DvMF_2713 at 3436.238 kb on - strand, within DvMF_2713 at 3436.318 kb on - strand, within DvMF_2713 at 3436.347 kb on - strand, within DvMF_2713 at 3436.421 kb on + strand, within DvMF_2713 at 3436.421 kb on + strand, within DvMF_2713 at 3436.451 kb on + strand, within DvMF_2713 at 3436.565 kb on + strand at 3436.639 kb on - strand at 3436.773 kb on - strand at 3436.907 kb on + strand, within DvMF_2714 at 3437.234 kb on - strand, within DvMF_2714 at 3437.323 kb on - strand, within DvMF_2714 at 3437.463 kb on + strand, within DvMF_2714 at 3437.495 kb on + strand, within DvMF_2714 at 3437.528 kb on - strand, within DvMF_2714 at 3437.544 kb on - strand, within DvMF_2714 at 3437.544 kb on - strand, within DvMF_2714 at 3437.833 kb on + strand at 3437.937 kb on + strand at 3437.937 kb on + strand at 3438.103 kb on + strand at 3438.253 kb on + strand, within DvMF_2715 at 3438.314 kb on + strand, within DvMF_2715 at 3438.411 kb on + strand, within DvMF_2715
Per-strain Table
Position Strand Gene LocusTag Fraction 60 mM Lactate (C) remove 3,435,845 - DvMF_2713 0.56 +0.7 3,435,870 + DvMF_2713 0.57 -1.1 3,435,880 + DvMF_2713 0.58 +0.7 3,435,951 + DvMF_2713 0.61 -0.2 3,436,136 + DvMF_2713 0.71 -0.7 3,436,238 - DvMF_2713 0.76 +0.2 3,436,318 - DvMF_2713 0.80 +0.2 3,436,347 - DvMF_2713 0.81 -0.4 3,436,421 + DvMF_2713 0.85 +0.5 3,436,421 + DvMF_2713 0.85 +0.5 3,436,451 + DvMF_2713 0.87 +0.4 3,436,565 + -0.8 3,436,639 - +0.5 3,436,773 - +0.5 3,436,907 + DvMF_2714 0.18 +0.1 3,437,234 - DvMF_2714 0.51 +0.2 3,437,323 - DvMF_2714 0.60 +0.8 3,437,463 + DvMF_2714 0.75 +0.4 3,437,495 + DvMF_2714 0.78 +1.3 3,437,528 - DvMF_2714 0.81 +0.4 3,437,544 - DvMF_2714 0.83 +0.4 3,437,544 - DvMF_2714 0.83 +0.7 3,437,833 + +0.6 3,437,937 + -0.3 3,437,937 + +2.4 3,438,103 + +0.8 3,438,253 + DvMF_2715 0.18 +1.3 3,438,314 + DvMF_2715 0.36 +0.6 3,438,411 + DvMF_2715 0.66 +0.8
Or see this region's nucleotide sequence