Experiment: 60 mM Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0696 and DvMF_0697 overlap by 4 nucleotides DvMF_0697 and DvMF_0698 overlap by 1 nucleotides DvMF_0698 and DvMF_0699 are separated by 44 nucleotides
DvMF_0696: DvMF_0696 - secretion protein HlyD family protein (RefSeq), at 843,362 to 844,423
_0696
DvMF_0697: DvMF_0697 - ABC transporter related (RefSeq), at 844,420 to 845,118
_0697
DvMF_0698: DvMF_0698 - protein of unknown function DUF214 (RefSeq), at 845,118 to 846,248
_0698
DvMF_0699: DvMF_0699 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 846,293 to 847,762
_0699
Position (kb) 845
846
847 Strain fitness (log2 ratio) -1
0
1 at 844.237 kb on - strand, within DvMF_0696 at 844.248 kb on - strand, within DvMF_0696 at 844.254 kb on + strand, within DvMF_0696 at 844.262 kb on - strand, within DvMF_0696 at 844.327 kb on + strand at 844.660 kb on - strand, within DvMF_0697 at 845.463 kb on + strand, within DvMF_0698 at 845.631 kb on - strand, within DvMF_0698 at 845.844 kb on + strand, within DvMF_0698 at 845.983 kb on - strand, within DvMF_0698 at 845.995 kb on + strand, within DvMF_0698 at 846.680 kb on - strand, within DvMF_0699 at 846.747 kb on + strand, within DvMF_0699 at 846.747 kb on + strand, within DvMF_0699 at 846.830 kb on - strand, within DvMF_0699
Per-strain Table
Position Strand Gene LocusTag Fraction 60 mM Lactate (C) remove 844,237 - DvMF_0696 0.82 +0.7 844,248 - DvMF_0696 0.83 +0.5 844,254 + DvMF_0696 0.84 +0.5 844,262 - DvMF_0696 0.85 +0.3 844,327 + -0.3 844,660 - DvMF_0697 0.34 +0.1 845,463 + DvMF_0698 0.31 +0.6 845,631 - DvMF_0698 0.45 -0.0 845,844 + DvMF_0698 0.64 +0.3 845,983 - DvMF_0698 0.76 +1.1 845,995 + DvMF_0698 0.78 -0.9 846,680 - DvMF_0699 0.26 +0.9 846,747 + DvMF_0699 0.31 +0.3 846,747 + DvMF_0699 0.31 +1.0 846,830 - DvMF_0699 0.37 +0.3
Or see this region's nucleotide sequence