Experiment: 60 mM Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0624 and DvMF_0625 are separated by 13 nucleotides DvMF_0625 and DvMF_0626 are separated by 77 nucleotides DvMF_0626 and DvMF_0627 are separated by 464 nucleotides
DvMF_0624: DvMF_0624 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 746,056 to 747,297
_0624
DvMF_0625: DvMF_0625 - protein of unknown function DUF1641 (RefSeq), at 747,311 to 748,012
_0625
DvMF_0626: DvMF_0626 - response regulator receiver protein (RefSeq), at 748,090 to 748,476
_0626
DvMF_0627: DvMF_0627 - Sel1 domain protein repeat-containing protein (RefSeq), at 748,941 to 749,627
_0627
Position (kb) 748
749 Strain fitness (log2 ratio) -1
0
1 at 747.142 kb on - strand, within DvMF_0624 at 747.210 kb on - strand at 747.270 kb on + strand at 747.435 kb on + strand, within DvMF_0625 at 747.602 kb on + strand, within DvMF_0625 at 747.621 kb on - strand, within DvMF_0625 at 747.888 kb on + strand, within DvMF_0625 at 747.917 kb on - strand, within DvMF_0625 at 748.190 kb on + strand, within DvMF_0626 at 748.302 kb on + strand, within DvMF_0626 at 748.333 kb on - strand, within DvMF_0626 at 748.333 kb on - strand, within DvMF_0626 at 748.333 kb on - strand, within DvMF_0626 at 748.372 kb on - strand, within DvMF_0626 at 748.470 kb on + strand at 748.523 kb on + strand at 748.602 kb on + strand at 748.602 kb on + strand at 748.610 kb on - strand at 748.754 kb on + strand at 749.167 kb on + strand, within DvMF_0627 at 749.173 kb on + strand, within DvMF_0627 at 749.258 kb on + strand, within DvMF_0627 at 749.353 kb on - strand, within DvMF_0627 at 749.442 kb on + strand, within DvMF_0627
Per-strain Table
Position Strand Gene LocusTag Fraction 60 mM Lactate (C) remove 747,142 - DvMF_0624 0.87 +0.7 747,210 - +0.3 747,270 + +0.2 747,435 + DvMF_0625 0.18 +0.1 747,602 + DvMF_0625 0.41 +0.8 747,621 - DvMF_0625 0.44 +0.4 747,888 + DvMF_0625 0.82 +0.3 747,917 - DvMF_0625 0.86 +1.0 748,190 + DvMF_0626 0.26 -0.1 748,302 + DvMF_0626 0.55 -0.3 748,333 - DvMF_0626 0.63 +0.4 748,333 - DvMF_0626 0.63 +0.2 748,333 - DvMF_0626 0.63 +0.0 748,372 - DvMF_0626 0.73 -0.2 748,470 + +0.4 748,523 + -0.0 748,602 + +0.5 748,602 + +0.6 748,610 - +1.0 748,754 + +1.4 749,167 + DvMF_0627 0.33 +0.4 749,173 + DvMF_0627 0.34 +0.6 749,258 + DvMF_0627 0.46 +0.0 749,353 - DvMF_0627 0.60 +0.5 749,442 + DvMF_0627 0.73 +1.7
Or see this region's nucleotide sequence