Experiment: 60 mM Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0437 and DvMF_0438 are separated by 112 nucleotides DvMF_0438 and DvMF_0439 are separated by 0 nucleotides DvMF_0439 and DvMF_0440 overlap by 4 nucleotides DvMF_0440 and DvMF_0441 are separated by 222 nucleotides
DvMF_0437: DvMF_0437 - magnesium-translocating P-type ATPase (RefSeq), at 511,693 to 514,335
_0437
DvMF_0438: DvMF_0438 - hypothetical protein (RefSeq), at 514,448 to 514,726
_0438
DvMF_0439: DvMF_0439 - phosphoglyceromutase (RefSeq), at 514,727 to 516,400
_0439
DvMF_0440: DvMF_0440 - iojap-like protein (RefSeq), at 516,397 to 516,984
_0440
DvMF_0441: DvMF_0441 - nitroreductase (RefSeq), at 517,207 to 517,860
_0441
Position (kb) 514
515
516
517 Strain fitness (log2 ratio) -1
0
1 at 513.799 kb on - strand, within DvMF_0437 at 513.854 kb on - strand, within DvMF_0437 at 513.937 kb on + strand, within DvMF_0437 at 513.968 kb on + strand, within DvMF_0437 at 513.971 kb on - strand, within DvMF_0437 at 514.042 kb on - strand, within DvMF_0437 at 514.253 kb on - strand at 514.647 kb on - strand, within DvMF_0438 at 516.590 kb on + strand, within DvMF_0440 at 516.800 kb on + strand, within DvMF_0440 at 516.877 kb on + strand, within DvMF_0440 at 516.885 kb on - strand, within DvMF_0440 at 516.997 kb on + strand at 516.998 kb on - strand at 517.019 kb on + strand at 517.027 kb on - strand at 517.204 kb on + strand at 517.212 kb on - strand at 517.384 kb on + strand, within DvMF_0441
Per-strain Table
Position Strand Gene LocusTag Fraction 60 mM Lactate (C) remove 513,799 - DvMF_0437 0.80 +0.2 513,854 - DvMF_0437 0.82 +0.3 513,937 + DvMF_0437 0.85 +0.4 513,968 + DvMF_0437 0.86 +0.6 513,971 - DvMF_0437 0.86 +0.7 514,042 - DvMF_0437 0.89 +0.9 514,253 - +0.3 514,647 - DvMF_0438 0.71 +0.1 516,590 + DvMF_0440 0.33 -1.5 516,800 + DvMF_0440 0.69 -0.4 516,877 + DvMF_0440 0.82 -1.6 516,885 - DvMF_0440 0.83 -0.3 516,997 + +0.7 516,998 - +0.4 517,019 + +0.3 517,027 - +0.2 517,204 + +0.8 517,212 - +0.4 517,384 + DvMF_0441 0.27 +1.1
Or see this region's nucleotide sequence