Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05970 and H281DRAFT_05971 are separated by 114 nucleotides H281DRAFT_05971 and H281DRAFT_05972 are separated by 136 nucleotides H281DRAFT_05972 and H281DRAFT_05973 are separated by 162 nucleotides
H281DRAFT_05970: H281DRAFT_05970 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 112,952 to 113,554
_05970
H281DRAFT_05971: H281DRAFT_05971 - Uncharacterized membrane protein YoaK, UPF0700 family, at 113,669 to 114,481
_05971
H281DRAFT_05972: H281DRAFT_05972 - conserved hypothetical protein, at 114,618 to 114,932
_05972
H281DRAFT_05973: H281DRAFT_05973 - carbon-monoxide dehydrogenase small subunit, at 115,095 to 115,586
_05973
Position (kb) 113
114
115 Strain fitness (log2 ratio) -1
0
1
2 at 113.034 kb on + strand, within H281DRAFT_05970 at 113.507 kb on - strand at 113.887 kb on - strand, within H281DRAFT_05971 at 114.400 kb on - strand at 114.604 kb on + strand at 114.621 kb on + strand at 114.857 kb on - strand, within H281DRAFT_05972 at 114.857 kb on - strand, within H281DRAFT_05972 at 114.859 kb on + strand, within H281DRAFT_05972 at 114.896 kb on - strand, within H281DRAFT_05972 at 115.076 kb on - strand at 115.239 kb on - strand, within H281DRAFT_05973
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 113,034 + H281DRAFT_05970 0.14 +2.1 113,507 - +0.2 113,887 - H281DRAFT_05971 0.27 +0.1 114,400 - -0.9 114,604 + +0.4 114,621 + +0.4 114,857 - H281DRAFT_05972 0.76 +0.3 114,857 - H281DRAFT_05972 0.76 +0.7 114,859 + H281DRAFT_05972 0.77 +0.9 114,896 - H281DRAFT_05972 0.88 -0.2 115,076 - -0.1 115,239 - H281DRAFT_05973 0.29 +0.1
Or see this region's nucleotide sequence