Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05644 and H281DRAFT_05645 are separated by 114 nucleotides H281DRAFT_05645 and H281DRAFT_05646 overlap by 103 nucleotides H281DRAFT_05646 and H281DRAFT_05647 are separated by 198 nucleotides
H281DRAFT_05644: H281DRAFT_05644 - phospholipid-binding lipoprotein MlaA, at 67,593 to 68,648
_05644
H281DRAFT_05645: H281DRAFT_05645 - phospholipid transport system substrate-binding protein, at 68,763 to 69,395
_05645
H281DRAFT_05646: H281DRAFT_05646 - hypothetical protein, at 69,293 to 69,682
_05646
H281DRAFT_05647: H281DRAFT_05647 - ABC-2 type transport system ATP-binding protein, at 69,881 to 70,813
_05647
Position (kb) 69
70 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 68.316 kb on + strand, within H281DRAFT_05644 at 68.316 kb on + strand, within H281DRAFT_05644 at 68.316 kb on + strand, within H281DRAFT_05644 at 68.317 kb on - strand, within H281DRAFT_05644 at 68.343 kb on + strand, within H281DRAFT_05644 at 68.343 kb on + strand, within H281DRAFT_05644 at 68.671 kb on + strand at 68.718 kb on - strand at 68.748 kb on + strand at 68.762 kb on + strand at 69.087 kb on + strand, within H281DRAFT_05645 at 69.088 kb on - strand, within H281DRAFT_05645 at 69.088 kb on - strand, within H281DRAFT_05645 at 69.088 kb on - strand, within H281DRAFT_05645 at 69.130 kb on - strand, within H281DRAFT_05645 at 69.225 kb on + strand, within H281DRAFT_05645 at 69.226 kb on - strand, within H281DRAFT_05645 at 69.252 kb on + strand, within H281DRAFT_05645 at 69.252 kb on + strand, within H281DRAFT_05645 at 69.291 kb on + strand, within H281DRAFT_05645 at 69.292 kb on - strand, within H281DRAFT_05645 at 69.529 kb on + strand, within H281DRAFT_05646 at 69.529 kb on + strand, within H281DRAFT_05646 at 69.529 kb on + strand, within H281DRAFT_05646 at 69.650 kb on + strand at 69.661 kb on + strand at 69.662 kb on - strand at 69.729 kb on - strand at 69.737 kb on - strand at 69.759 kb on + strand at 69.759 kb on + strand at 69.851 kb on + strand at 69.891 kb on + strand at 69.917 kb on + strand at 70.187 kb on + strand, within H281DRAFT_05647 at 70.187 kb on + strand, within H281DRAFT_05647 at 70.190 kb on + strand, within H281DRAFT_05647 at 70.451 kb on + strand, within H281DRAFT_05647 at 70.451 kb on + strand, within H281DRAFT_05647 at 70.451 kb on + strand, within H281DRAFT_05647
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 68,316 + H281DRAFT_05644 0.68 -0.3 68,316 + H281DRAFT_05644 0.68 -0.1 68,316 + H281DRAFT_05644 0.68 +0.3 68,317 - H281DRAFT_05644 0.69 +0.3 68,343 + H281DRAFT_05644 0.71 +0.0 68,343 + H281DRAFT_05644 0.71 -1.0 68,671 + +0.2 68,718 - -2.4 68,748 + +1.0 68,762 + -0.5 69,087 + H281DRAFT_05645 0.51 -0.9 69,088 - H281DRAFT_05645 0.51 -3.7 69,088 - H281DRAFT_05645 0.51 -0.3 69,088 - H281DRAFT_05645 0.51 -2.8 69,130 - H281DRAFT_05645 0.58 -1.1 69,225 + H281DRAFT_05645 0.73 -2.0 69,226 - H281DRAFT_05645 0.73 -2.4 69,252 + H281DRAFT_05645 0.77 -2.2 69,252 + H281DRAFT_05645 0.77 +1.1 69,291 + H281DRAFT_05645 0.83 -2.5 69,292 - H281DRAFT_05645 0.84 -2.3 69,529 + H281DRAFT_05646 0.61 +0.9 69,529 + H281DRAFT_05646 0.61 -3.9 69,529 + H281DRAFT_05646 0.61 -1.6 69,650 + -0.3 69,661 + +0.5 69,662 - +0.5 69,729 - +0.1 69,737 - -0.3 69,759 + +0.6 69,759 + +0.2 69,851 + +0.6 69,891 + -0.4 69,917 + -0.1 70,187 + H281DRAFT_05647 0.33 +0.5 70,187 + H281DRAFT_05647 0.33 -0.0 70,190 + H281DRAFT_05647 0.33 -0.9 70,451 + H281DRAFT_05647 0.61 +0.3 70,451 + H281DRAFT_05647 0.61 -0.0 70,451 + H281DRAFT_05647 0.61 +0.2
Or see this region's nucleotide sequence