Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05515 and H281DRAFT_05516 are separated by 41 nucleotides H281DRAFT_05516 and H281DRAFT_05517 are separated by 12 nucleotides H281DRAFT_05517 and H281DRAFT_05518 are separated by 0 nucleotides
H281DRAFT_05515: H281DRAFT_05515 - branched-chain amino acid transport system substrate-binding protein, at 96,223 to 97,356
_05515
H281DRAFT_05516: H281DRAFT_05516 - enoyl-CoA hydratase, at 97,398 to 98,192
_05516
H281DRAFT_05517: H281DRAFT_05517 - Predicted nucleic-acid-binding protein containing a Zn-ribbon, at 98,205 to 98,531
_05517
H281DRAFT_05518: H281DRAFT_05518 - acetyl-CoA C-acetyltransferase, at 98,532 to 99,692
_05518
Position (kb) 97
98
99 Strain fitness (log2 ratio) -1
0
1
2 at 96.419 kb on - strand, within H281DRAFT_05515 at 97.073 kb on - strand, within H281DRAFT_05515 at 97.217 kb on + strand, within H281DRAFT_05515 at 97.698 kb on - strand, within H281DRAFT_05516 at 97.940 kb on - strand, within H281DRAFT_05516 at 98.050 kb on + strand, within H281DRAFT_05516 at 98.051 kb on - strand, within H281DRAFT_05516 at 98.199 kb on + strand at 98.200 kb on - strand at 98.207 kb on - strand at 98.221 kb on + strand at 98.329 kb on - strand, within H281DRAFT_05517 at 98.342 kb on - strand, within H281DRAFT_05517 at 98.458 kb on - strand, within H281DRAFT_05517 at 98.458 kb on - strand, within H281DRAFT_05517 at 98.557 kb on - strand at 98.601 kb on + strand at 98.859 kb on + strand, within H281DRAFT_05518 at 98.860 kb on - strand, within H281DRAFT_05518 at 98.860 kb on - strand, within H281DRAFT_05518 at 98.883 kb on - strand, within H281DRAFT_05518 at 98.891 kb on - strand, within H281DRAFT_05518 at 98.891 kb on - strand, within H281DRAFT_05518 at 98.991 kb on + strand, within H281DRAFT_05518 at 98.991 kb on + strand, within H281DRAFT_05518
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 96,419 - H281DRAFT_05515 0.17 +0.1 97,073 - H281DRAFT_05515 0.75 -0.1 97,217 + H281DRAFT_05515 0.88 -0.5 97,698 - H281DRAFT_05516 0.38 +1.9 97,940 - H281DRAFT_05516 0.68 +0.9 98,050 + H281DRAFT_05516 0.82 +0.7 98,051 - H281DRAFT_05516 0.82 -0.1 98,199 + -0.4 98,200 - +0.0 98,207 - -0.1 98,221 + +0.7 98,329 - H281DRAFT_05517 0.38 -0.6 98,342 - H281DRAFT_05517 0.42 -0.0 98,458 - H281DRAFT_05517 0.77 -0.5 98,458 - H281DRAFT_05517 0.77 +0.3 98,557 - -0.1 98,601 + -0.2 98,859 + H281DRAFT_05518 0.28 -0.5 98,860 - H281DRAFT_05518 0.28 -0.4 98,860 - H281DRAFT_05518 0.28 +0.1 98,883 - H281DRAFT_05518 0.30 -0.2 98,891 - H281DRAFT_05518 0.31 -0.2 98,891 - H281DRAFT_05518 0.31 -0.2 98,991 + H281DRAFT_05518 0.40 +0.8 98,991 + H281DRAFT_05518 0.40 -0.2
Or see this region's nucleotide sequence