Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05436 and H281DRAFT_05437 are separated by 49 nucleotides H281DRAFT_05437 and H281DRAFT_05438 are separated by 812 nucleotides
H281DRAFT_05436: H281DRAFT_05436 - Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family, at 13,720 to 14,712
_05436
H281DRAFT_05437: H281DRAFT_05437 - Sugar phosphate permease, at 14,762 to 16,114
_05437
H281DRAFT_05438: H281DRAFT_05438 - transcriptional regulator, IclR family, at 16,927 to 17,739
_05438
Position (kb) 14
15
16
17 Strain fitness (log2 ratio) -1
0
1
2 at 13.814 kb on - strand at 13.816 kb on - strand at 13.869 kb on - strand, within H281DRAFT_05436 at 14.040 kb on + strand, within H281DRAFT_05436 at 14.041 kb on - strand at 14.041 kb on - strand, within H281DRAFT_05436 at 14.124 kb on - strand, within H281DRAFT_05436 at 14.184 kb on + strand, within H281DRAFT_05436 at 14.358 kb on + strand, within H281DRAFT_05436 at 14.358 kb on + strand, within H281DRAFT_05436 at 14.449 kb on - strand, within H281DRAFT_05436 at 14.468 kb on - strand, within H281DRAFT_05436 at 14.473 kb on - strand, within H281DRAFT_05436 at 14.677 kb on + strand at 14.678 kb on - strand at 14.932 kb on - strand, within H281DRAFT_05437 at 15.024 kb on + strand at 15.025 kb on - strand, within H281DRAFT_05437 at 15.135 kb on + strand, within H281DRAFT_05437 at 15.225 kb on + strand, within H281DRAFT_05437 at 15.435 kb on + strand, within H281DRAFT_05437 at 15.436 kb on - strand, within H281DRAFT_05437 at 15.563 kb on + strand, within H281DRAFT_05437 at 15.564 kb on - strand, within H281DRAFT_05437 at 15.595 kb on + strand, within H281DRAFT_05437 at 16.128 kb on - strand at 16.202 kb on + strand at 16.202 kb on + strand at 16.233 kb on - strand at 16.349 kb on + strand at 16.393 kb on - strand at 16.446 kb on - strand at 16.612 kb on + strand at 16.612 kb on + strand at 16.621 kb on + strand at 16.622 kb on - strand at 16.714 kb on - strand at 16.817 kb on + strand at 16.915 kb on + strand at 16.915 kb on + strand at 16.915 kb on + strand at 16.916 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 13,814 - +0.9 13,816 - +1.6 13,869 - H281DRAFT_05436 0.15 +0.7 14,040 + H281DRAFT_05436 0.32 -0.4 14,041 - +1.9 14,041 - H281DRAFT_05436 0.32 -0.0 14,124 - H281DRAFT_05436 0.41 +0.0 14,184 + H281DRAFT_05436 0.47 -0.1 14,358 + H281DRAFT_05436 0.64 +0.2 14,358 + H281DRAFT_05436 0.64 -0.5 14,449 - H281DRAFT_05436 0.73 +0.1 14,468 - H281DRAFT_05436 0.75 +0.2 14,473 - H281DRAFT_05436 0.76 +0.5 14,677 + -0.3 14,678 - +0.3 14,932 - H281DRAFT_05437 0.13 +0.7 15,024 + +1.7 15,025 - H281DRAFT_05437 0.19 +0.9 15,135 + H281DRAFT_05437 0.28 +0.4 15,225 + H281DRAFT_05437 0.34 -0.0 15,435 + H281DRAFT_05437 0.50 -0.4 15,436 - H281DRAFT_05437 0.50 +0.8 15,563 + H281DRAFT_05437 0.59 +0.3 15,564 - H281DRAFT_05437 0.59 -0.2 15,595 + H281DRAFT_05437 0.62 +0.8 16,128 - +0.3 16,202 + -0.3 16,202 + +0.0 16,233 - +0.8 16,349 + +0.5 16,393 - +0.1 16,446 - -0.3 16,612 + -0.4 16,612 + -0.3 16,621 + +0.0 16,622 - +0.3 16,714 - -0.7 16,817 + +0.8 16,915 + -0.6 16,915 + -0.3 16,915 + +0.2 16,916 - -0.1
Or see this region's nucleotide sequence