Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04814 and H281DRAFT_04815 are separated by 10 nucleotides H281DRAFT_04815 and H281DRAFT_04816 overlap by 14 nucleotides H281DRAFT_04816 and H281DRAFT_04817 are separated by 86 nucleotides
H281DRAFT_04814: H281DRAFT_04814 - putative transcriptional regulator, at 249,856 to 250,434
_04814
H281DRAFT_04815: H281DRAFT_04815 - putative holliday junction resolvase, at 250,445 to 250,885
_04815
H281DRAFT_04816: H281DRAFT_04816 - pyrimidine operon attenuation protein / uracil phosphoribosyltransferase, at 250,872 to 251,411
_04816
H281DRAFT_04817: H281DRAFT_04817 - aspartate carbamoyltransferase, at 251,498 to 252,523
_04817
Position (kb) 250
251
252 Strain fitness (log2 ratio) -1
0
1
2 at 250.081 kb on + strand, within H281DRAFT_04814 at 250.147 kb on + strand, within H281DRAFT_04814 at 250.147 kb on + strand, within H281DRAFT_04814 at 250.147 kb on + strand, within H281DRAFT_04814 at 250.147 kb on + strand, within H281DRAFT_04814 at 250.147 kb on + strand, within H281DRAFT_04814 at 250.148 kb on - strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.149 kb on + strand, within H281DRAFT_04814 at 250.150 kb on - strand, within H281DRAFT_04814 at 250.852 kb on - strand at 250.852 kb on - strand at 250.852 kb on - strand at 250.992 kb on + strand, within H281DRAFT_04816 at 250.993 kb on - strand, within H281DRAFT_04816 at 250.993 kb on - strand, within H281DRAFT_04816 at 251.178 kb on + strand, within H281DRAFT_04816 at 251.178 kb on + strand, within H281DRAFT_04816 at 251.178 kb on + strand, within H281DRAFT_04816 at 251.179 kb on - strand, within H281DRAFT_04816 at 251.179 kb on - strand, within H281DRAFT_04816 at 251.217 kb on + strand, within H281DRAFT_04816 at 251.217 kb on + strand, within H281DRAFT_04816 at 251.492 kb on + strand at 251.492 kb on + strand at 251.492 kb on + strand at 252.029 kb on + strand, within H281DRAFT_04817 at 252.029 kb on + strand, within H281DRAFT_04817 at 252.029 kb on + strand, within H281DRAFT_04817 at 252.029 kb on + strand, within H281DRAFT_04817 at 252.030 kb on - strand, within H281DRAFT_04817 at 252.030 kb on - strand, within H281DRAFT_04817 at 252.030 kb on - strand, within H281DRAFT_04817 at 252.044 kb on + strand, within H281DRAFT_04817 at 252.045 kb on - strand, within H281DRAFT_04817 at 252.173 kb on - strand, within H281DRAFT_04817 at 252.317 kb on + strand, within H281DRAFT_04817 at 252.317 kb on + strand, within H281DRAFT_04817
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 250,081 + H281DRAFT_04814 0.39 -0.0 250,147 + H281DRAFT_04814 0.50 +0.3 250,147 + H281DRAFT_04814 0.50 -0.6 250,147 + H281DRAFT_04814 0.50 +0.5 250,147 + H281DRAFT_04814 0.50 +0.1 250,147 + H281DRAFT_04814 0.50 +0.5 250,148 - H281DRAFT_04814 0.50 -1.0 250,149 + H281DRAFT_04814 0.51 -0.0 250,149 + H281DRAFT_04814 0.51 +0.3 250,149 + H281DRAFT_04814 0.51 +0.3 250,149 + H281DRAFT_04814 0.51 +1.9 250,149 + H281DRAFT_04814 0.51 +0.4 250,149 + H281DRAFT_04814 0.51 +0.3 250,149 + H281DRAFT_04814 0.51 +0.1 250,150 - H281DRAFT_04814 0.51 +1.1 250,852 - -0.6 250,852 - -0.2 250,852 - +0.4 250,992 + H281DRAFT_04816 0.22 +0.6 250,993 - H281DRAFT_04816 0.22 -0.1 250,993 - H281DRAFT_04816 0.22 -0.1 251,178 + H281DRAFT_04816 0.57 +0.7 251,178 + H281DRAFT_04816 0.57 +0.2 251,178 + H281DRAFT_04816 0.57 +1.0 251,179 - H281DRAFT_04816 0.57 +1.3 251,179 - H281DRAFT_04816 0.57 +1.0 251,217 + H281DRAFT_04816 0.64 -0.3 251,217 + H281DRAFT_04816 0.64 +0.4 251,492 + -0.2 251,492 + -0.2 251,492 + -0.0 252,029 + H281DRAFT_04817 0.52 -0.2 252,029 + H281DRAFT_04817 0.52 -1.0 252,029 + H281DRAFT_04817 0.52 +0.3 252,029 + H281DRAFT_04817 0.52 -0.5 252,030 - H281DRAFT_04817 0.52 +0.7 252,030 - H281DRAFT_04817 0.52 -0.0 252,030 - H281DRAFT_04817 0.52 +0.0 252,044 + H281DRAFT_04817 0.53 +0.4 252,045 - H281DRAFT_04817 0.53 -0.0 252,173 - H281DRAFT_04817 0.66 -0.3 252,317 + H281DRAFT_04817 0.80 +0.2 252,317 + H281DRAFT_04817 0.80 +0.3
Or see this region's nucleotide sequence