Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04473 and H281DRAFT_04474 are separated by 69 nucleotides H281DRAFT_04474 and H281DRAFT_04475 are separated by 203 nucleotides
H281DRAFT_04473: H281DRAFT_04473 - methyl-accepting chemotaxis protein, at 201,959 to 203,689
_04473
H281DRAFT_04474: H281DRAFT_04474 - RND family efflux transporter, MFP subunit, at 203,759 to 204,619
_04474
H281DRAFT_04475: H281DRAFT_04475 - Uncharacterized membrane protein YccC, at 204,823 to 207,033
_04475
Position (kb) 203
204
205 Strain fitness (log2 ratio) -2
-1
0
1 at 202.808 kb on + strand, within H281DRAFT_04473 at 203.387 kb on - strand, within H281DRAFT_04473 at 203.694 kb on + strand at 203.695 kb on - strand at 203.788 kb on + strand at 203.788 kb on + strand at 203.788 kb on + strand at 203.928 kb on + strand, within H281DRAFT_04474 at 204.039 kb on + strand, within H281DRAFT_04474 at 204.039 kb on + strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.136 kb on - strand, within H281DRAFT_04474 at 204.191 kb on + strand, within H281DRAFT_04474 at 204.378 kb on + strand at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.578 kb on + strand at 204.579 kb on - strand at 204.802 kb on + strand at 204.932 kb on - strand at 204.932 kb on - strand at 204.932 kb on - strand at 205.125 kb on - strand, within H281DRAFT_04475 at 205.456 kb on - strand, within H281DRAFT_04475 at 205.472 kb on + strand, within H281DRAFT_04475
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 202,808 + H281DRAFT_04473 0.49 +0.2 203,387 - H281DRAFT_04473 0.82 +0.6 203,694 + +0.6 203,695 - +0.0 203,788 + -2.2 203,788 + -0.9 203,788 + -1.2 203,928 + H281DRAFT_04474 0.20 -0.7 204,039 + H281DRAFT_04474 0.33 -2.3 204,039 + H281DRAFT_04474 0.33 -1.3 204,046 - H281DRAFT_04474 0.33 +0.8 204,046 - H281DRAFT_04474 0.33 -0.7 204,046 - H281DRAFT_04474 0.33 -0.8 204,136 - H281DRAFT_04474 0.44 -1.2 204,191 + H281DRAFT_04474 0.50 -0.3 204,378 + +0.5 204,531 + H281DRAFT_04474 0.90 -0.7 204,531 + H281DRAFT_04474 0.90 -1.0 204,531 + H281DRAFT_04474 0.90 -1.1 204,531 + H281DRAFT_04474 0.90 -1.1 204,532 - H281DRAFT_04474 0.90 +0.8 204,532 - H281DRAFT_04474 0.90 +0.5 204,532 - H281DRAFT_04474 0.90 -0.4 204,532 - H281DRAFT_04474 0.90 -0.8 204,578 + -1.3 204,579 - -1.3 204,802 + -0.5 204,932 - +0.4 204,932 - -0.6 204,932 - -0.9 205,125 - H281DRAFT_04475 0.14 -1.0 205,456 - H281DRAFT_04475 0.29 -0.4 205,472 + H281DRAFT_04475 0.29 -1.2
Or see this region's nucleotide sequence