Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03818 and H281DRAFT_03819 are separated by 51 nucleotides H281DRAFT_03819 and H281DRAFT_03820 are separated by 39 nucleotides H281DRAFT_03820 and H281DRAFT_03821 are separated by 226 nucleotides
H281DRAFT_03818: H281DRAFT_03818 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 342,294 to 343,916
_03818
H281DRAFT_03819: H281DRAFT_03819 - hypothetical protein, at 343,968 to 345,551
_03819
H281DRAFT_03820: H281DRAFT_03820 - methylated-DNA-[protein]-cysteine S-methyltransferase, at 345,591 to 346,193
_03820
H281DRAFT_03821: H281DRAFT_03821 - serine/threonine protein kinase, at 346,420 to 347,799
_03821
Position (kb) 343
344
345
346 Strain fitness (log2 ratio) -1
0
1 at 343.172 kb on + strand, within H281DRAFT_03818 at 343.940 kb on - strand at 344.142 kb on - strand, within H281DRAFT_03819 at 344.325 kb on + strand, within H281DRAFT_03819 at 344.325 kb on + strand, within H281DRAFT_03819 at 344.325 kb on + strand, within H281DRAFT_03819 at 344.446 kb on - strand, within H281DRAFT_03819 at 344.466 kb on + strand, within H281DRAFT_03819 at 344.467 kb on - strand, within H281DRAFT_03819 at 344.467 kb on - strand, within H281DRAFT_03819 at 344.467 kb on - strand, within H281DRAFT_03819 at 344.467 kb on - strand, within H281DRAFT_03819 at 344.467 kb on - strand, within H281DRAFT_03819 at 344.505 kb on + strand, within H281DRAFT_03819 at 344.534 kb on + strand, within H281DRAFT_03819 at 344.820 kb on + strand, within H281DRAFT_03819 at 344.820 kb on + strand, within H281DRAFT_03819 at 344.820 kb on + strand, within H281DRAFT_03819 at 344.820 kb on + strand at 344.820 kb on + strand, within H281DRAFT_03819 at 344.820 kb on + strand, within H281DRAFT_03819 at 344.822 kb on + strand, within H281DRAFT_03819 at 344.823 kb on - strand, within H281DRAFT_03819 at 344.833 kb on - strand, within H281DRAFT_03819 at 345.300 kb on + strand, within H281DRAFT_03819 at 346.123 kb on - strand, within H281DRAFT_03820 at 346.186 kb on + strand at 346.195 kb on + strand at 346.256 kb on - strand at 346.316 kb on + strand at 346.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 343,172 + H281DRAFT_03818 0.54 +0.2 343,940 - +0.2 344,142 - H281DRAFT_03819 0.11 +0.7 344,325 + H281DRAFT_03819 0.23 +0.3 344,325 + H281DRAFT_03819 0.23 +0.3 344,325 + H281DRAFT_03819 0.23 -0.8 344,446 - H281DRAFT_03819 0.30 +0.3 344,466 + H281DRAFT_03819 0.31 -0.2 344,467 - H281DRAFT_03819 0.32 +0.2 344,467 - H281DRAFT_03819 0.32 -0.1 344,467 - H281DRAFT_03819 0.32 +0.2 344,467 - H281DRAFT_03819 0.32 +0.2 344,467 - H281DRAFT_03819 0.32 +0.1 344,505 + H281DRAFT_03819 0.34 -0.0 344,534 + H281DRAFT_03819 0.36 +0.5 344,820 + H281DRAFT_03819 0.54 -0.1 344,820 + H281DRAFT_03819 0.54 +0.3 344,820 + H281DRAFT_03819 0.54 +0.6 344,820 + -0.8 344,820 + H281DRAFT_03819 0.54 +0.2 344,820 + H281DRAFT_03819 0.54 +0.3 344,822 + H281DRAFT_03819 0.54 +0.3 344,823 - H281DRAFT_03819 0.54 +0.4 344,833 - H281DRAFT_03819 0.55 +0.2 345,300 + H281DRAFT_03819 0.84 +1.0 346,123 - H281DRAFT_03820 0.88 +1.2 346,186 + +0.1 346,195 + +0.7 346,256 - -0.1 346,316 + +0.4 346,317 - +1.0
Or see this region's nucleotide sequence