Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03026 and H281DRAFT_03027 overlap by 4 nucleotides H281DRAFT_03027 and H281DRAFT_03028 are separated by 21 nucleotides
H281DRAFT_03026: H281DRAFT_03026 - phosphoenolpyruvate mutase, at 54,867 to 56,591
_03026
H281DRAFT_03027: H281DRAFT_03027 - phosphonopyruvate decarboxylase, at 56,588 to 57,769
_03027
H281DRAFT_03028: H281DRAFT_03028 - 2-aminoethylphosphonate-pyruvate transaminase, at 57,791 to 58,858
_03028
Position (kb) 56
57
58 Strain fitness (log2 ratio) -2
-1
0
1 at 55.655 kb on + strand, within H281DRAFT_03026 at 55.656 kb on - strand, within H281DRAFT_03026 at 55.756 kb on - strand, within H281DRAFT_03026 at 55.756 kb on - strand, within H281DRAFT_03026 at 56.068 kb on - strand, within H281DRAFT_03026 at 56.091 kb on + strand, within H281DRAFT_03026 at 56.091 kb on + strand, within H281DRAFT_03026 at 56.092 kb on - strand, within H281DRAFT_03026 at 56.092 kb on - strand, within H281DRAFT_03026 at 56.092 kb on - strand, within H281DRAFT_03026 at 56.454 kb on + strand at 56.454 kb on + strand at 56.455 kb on - strand at 56.684 kb on + strand at 56.684 kb on + strand at 56.684 kb on + strand at 56.711 kb on + strand, within H281DRAFT_03027 at 56.711 kb on + strand at 56.712 kb on - strand, within H281DRAFT_03027 at 56.712 kb on - strand, within H281DRAFT_03027 at 57.330 kb on - strand, within H281DRAFT_03027 at 57.779 kb on - strand at 57.927 kb on - strand, within H281DRAFT_03028 at 57.927 kb on - strand, within H281DRAFT_03028 at 58.052 kb on + strand, within H281DRAFT_03028 at 58.436 kb on + strand, within H281DRAFT_03028 at 58.436 kb on + strand, within H281DRAFT_03028 at 58.436 kb on + strand, within H281DRAFT_03028 at 58.437 kb on - strand, within H281DRAFT_03028 at 58.440 kb on - strand, within H281DRAFT_03028 at 58.515 kb on - strand, within H281DRAFT_03028 at 58.745 kb on + strand, within H281DRAFT_03028 at 58.746 kb on - strand, within H281DRAFT_03028
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 55,655 + H281DRAFT_03026 0.46 -2.7 55,656 - H281DRAFT_03026 0.46 -1.6 55,756 - H281DRAFT_03026 0.52 -1.1 55,756 - H281DRAFT_03026 0.52 -1.5 56,068 - H281DRAFT_03026 0.70 -0.8 56,091 + H281DRAFT_03026 0.71 -1.4 56,091 + H281DRAFT_03026 0.71 -1.1 56,092 - H281DRAFT_03026 0.71 -1.6 56,092 - H281DRAFT_03026 0.71 -1.5 56,092 - H281DRAFT_03026 0.71 -1.1 56,454 + -1.0 56,454 + -1.0 56,455 - +0.8 56,684 + -1.0 56,684 + -2.0 56,684 + -0.7 56,711 + H281DRAFT_03027 0.10 -1.2 56,711 + +0.5 56,712 - H281DRAFT_03027 0.10 -0.9 56,712 - H281DRAFT_03027 0.10 -1.4 57,330 - H281DRAFT_03027 0.63 -0.3 57,779 - -1.0 57,927 - H281DRAFT_03028 0.13 -1.4 57,927 - H281DRAFT_03028 0.13 -0.6 58,052 + H281DRAFT_03028 0.24 -2.5 58,436 + H281DRAFT_03028 0.60 -0.9 58,436 + H281DRAFT_03028 0.60 -1.7 58,436 + H281DRAFT_03028 0.60 -0.5 58,437 - H281DRAFT_03028 0.60 -2.4 58,440 - H281DRAFT_03028 0.61 -2.2 58,515 - H281DRAFT_03028 0.68 -0.6 58,745 + H281DRAFT_03028 0.89 -1.1 58,746 - H281DRAFT_03028 0.89 -1.1
Or see this region's nucleotide sequence