Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01868 and H281DRAFT_01869 are separated by 386 nucleotides H281DRAFT_01869 and H281DRAFT_01870 are separated by 114 nucleotides
H281DRAFT_01868: H281DRAFT_01868 - Predicted arabinose efflux permease, MFS family, at 780,820 to 782,142
_01868
H281DRAFT_01869: H281DRAFT_01869 - AraC-type DNA-binding protein, at 782,529 to 783,530
_01869
H281DRAFT_01870: H281DRAFT_01870 - Uncharacterized conserved protein, DUF849 family, at 783,645 to 784,703
_01870
Position (kb) 782
783
784 Strain fitness (log2 ratio) -1
0
1 at 781.717 kb on + strand, within H281DRAFT_01868 at 781.825 kb on + strand, within H281DRAFT_01868 at 782.028 kb on - strand at 782.125 kb on + strand at 782.182 kb on - strand at 782.483 kb on + strand at 782.484 kb on - strand at 782.484 kb on - strand at 782.627 kb on - strand at 782.832 kb on + strand, within H281DRAFT_01869 at 783.133 kb on - strand, within H281DRAFT_01869 at 783.243 kb on + strand, within H281DRAFT_01869 at 783.270 kb on - strand, within H281DRAFT_01869 at 783.394 kb on - strand, within H281DRAFT_01869 at 783.446 kb on + strand at 783.577 kb on - strand at 783.618 kb on + strand at 783.753 kb on + strand, within H281DRAFT_01870 at 784.006 kb on + strand, within H281DRAFT_01870 at 784.007 kb on - strand, within H281DRAFT_01870 at 784.069 kb on + strand, within H281DRAFT_01870 at 784.069 kb on + strand, within H281DRAFT_01870 at 784.070 kb on - strand, within H281DRAFT_01870 at 784.121 kb on - strand at 784.298 kb on + strand, within H281DRAFT_01870 at 784.431 kb on - strand, within H281DRAFT_01870
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 781,717 + H281DRAFT_01868 0.68 +0.8 781,825 + H281DRAFT_01868 0.76 +0.2 782,028 - +0.3 782,125 + +0.2 782,182 - -0.1 782,483 + -0.0 782,484 - +0.3 782,484 - -0.3 782,627 - +0.2 782,832 + H281DRAFT_01869 0.30 -0.5 783,133 - H281DRAFT_01869 0.60 +0.4 783,243 + H281DRAFT_01869 0.71 -1.0 783,270 - H281DRAFT_01869 0.74 -0.1 783,394 - H281DRAFT_01869 0.86 -0.8 783,446 + +0.3 783,577 - +0.8 783,618 + -1.1 783,753 + H281DRAFT_01870 0.10 -0.5 784,006 + H281DRAFT_01870 0.34 +0.6 784,007 - H281DRAFT_01870 0.34 -0.1 784,069 + H281DRAFT_01870 0.40 +0.1 784,069 + H281DRAFT_01870 0.40 +0.1 784,070 - H281DRAFT_01870 0.40 +0.5 784,121 - -0.2 784,298 + H281DRAFT_01870 0.62 +0.1 784,431 - H281DRAFT_01870 0.74 +0.1
Or see this region's nucleotide sequence