Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01806 and H281DRAFT_01807 are separated by 42 nucleotides H281DRAFT_01807 and H281DRAFT_01808 are separated by 256 nucleotides
H281DRAFT_01806: H281DRAFT_01806 - Nucleoside-diphosphate-sugar epimerase, at 707,452 to 708,519
_01806
H281DRAFT_01807: H281DRAFT_01807 - transcriptional regulator, IclR family, at 708,562 to 709,347
_01807
H281DRAFT_01808: H281DRAFT_01808 - Sugar phosphate permease, at 709,604 to 710,980
_01808
Position (kb) 708
709
710 Strain fitness (log2 ratio) -1
0
1 at 707.794 kb on + strand, within H281DRAFT_01806 at 707.887 kb on + strand, within H281DRAFT_01806 at 707.926 kb on + strand, within H281DRAFT_01806 at 707.927 kb on - strand, within H281DRAFT_01806 at 708.404 kb on + strand, within H281DRAFT_01806 at 708.414 kb on + strand at 708.568 kb on - strand at 709.042 kb on + strand, within H281DRAFT_01807 at 709.090 kb on + strand, within H281DRAFT_01807 at 709.104 kb on + strand at 709.169 kb on + strand, within H281DRAFT_01807 at 709.199 kb on + strand, within H281DRAFT_01807 at 709.303 kb on + strand at 709.348 kb on - strand at 709.512 kb on - strand at 709.934 kb on + strand, within H281DRAFT_01808 at 709.934 kb on + strand, within H281DRAFT_01808 at 709.934 kb on + strand, within H281DRAFT_01808 at 709.934 kb on + strand, within H281DRAFT_01808 at 710.070 kb on - strand, within H281DRAFT_01808 at 710.131 kb on - strand, within H281DRAFT_01808 at 710.131 kb on - strand, within H281DRAFT_01808 at 710.185 kb on - strand, within H281DRAFT_01808 at 710.223 kb on + strand, within H281DRAFT_01808 at 710.225 kb on + strand, within H281DRAFT_01808 at 710.225 kb on + strand, within H281DRAFT_01808 at 710.226 kb on - strand, within H281DRAFT_01808 at 710.227 kb on + strand, within H281DRAFT_01808 at 710.268 kb on + strand, within H281DRAFT_01808 at 710.304 kb on + strand, within H281DRAFT_01808
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 707,794 + H281DRAFT_01806 0.32 -0.9 707,887 + H281DRAFT_01806 0.41 -0.3 707,926 + H281DRAFT_01806 0.44 +0.6 707,927 - H281DRAFT_01806 0.44 +0.0 708,404 + H281DRAFT_01806 0.89 -0.1 708,414 + -0.0 708,568 - -0.0 709,042 + H281DRAFT_01807 0.61 +0.5 709,090 + H281DRAFT_01807 0.67 +0.4 709,104 + +0.1 709,169 + H281DRAFT_01807 0.77 +0.4 709,199 + H281DRAFT_01807 0.81 +0.6 709,303 + +0.2 709,348 - +0.1 709,512 - +0.1 709,934 + H281DRAFT_01808 0.24 -0.5 709,934 + H281DRAFT_01808 0.24 -0.3 709,934 + H281DRAFT_01808 0.24 -0.3 709,934 + H281DRAFT_01808 0.24 -0.1 710,070 - H281DRAFT_01808 0.34 +0.0 710,131 - H281DRAFT_01808 0.38 -0.3 710,131 - H281DRAFT_01808 0.38 -0.8 710,185 - H281DRAFT_01808 0.42 +0.1 710,223 + H281DRAFT_01808 0.45 -0.9 710,225 + H281DRAFT_01808 0.45 +0.7 710,225 + H281DRAFT_01808 0.45 +0.5 710,226 - H281DRAFT_01808 0.45 -0.1 710,227 + H281DRAFT_01808 0.45 -0.2 710,268 + H281DRAFT_01808 0.48 +0.3 710,304 + H281DRAFT_01808 0.51 -0.2
Or see this region's nucleotide sequence