Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01230 and H281DRAFT_01231 are separated by 260 nucleotides H281DRAFT_01231 and H281DRAFT_01232 are separated by 170 nucleotides H281DRAFT_01232 and H281DRAFT_01233 are separated by 365 nucleotides H281DRAFT_01233 and H281DRAFT_01234 are separated by 58 nucleotides
H281DRAFT_01230: H281DRAFT_01230 - 3-oxoacyl-[acyl-carrier protein] reductase, at 68,566 to 69,318
_01230
H281DRAFT_01231: H281DRAFT_01231 - hypothetical protein, at 69,579 to 69,923
_01231
H281DRAFT_01232: H281DRAFT_01232 - Predicted arabinose efflux permease, MFS family, at 70,094 to 71,356
_01232
H281DRAFT_01233: H281DRAFT_01233 - hypothetical protein, at 71,722 to 71,994
_01233
H281DRAFT_01234: H281DRAFT_01234 - hypothetical protein, at 72,053 to 72,361
_01234
Position (kb)
70
71
72 Strain fitness (log2 ratio)
-1
0
1
2 at 69.362 kb on - strand at 69.395 kb on + strand at 69.397 kb on + strand at 69.397 kb on + strand at 69.398 kb on - strand at 69.666 kb on + strand, within H281DRAFT_01231 at 69.841 kb on + strand, within H281DRAFT_01231 at 69.842 kb on - strand, within H281DRAFT_01231 at 69.968 kb on - strand at 70.013 kb on + strand at 70.015 kb on + strand at 70.019 kb on + strand at 70.096 kb on - strand at 70.367 kb on + strand, within H281DRAFT_01232 at 70.626 kb on + strand at 70.627 kb on - strand, within H281DRAFT_01232 at 71.058 kb on - strand, within H281DRAFT_01232 at 71.162 kb on + strand, within H281DRAFT_01232 at 71.341 kb on + strand at 71.351 kb on + strand at 71.352 kb on - strand at 71.356 kb on + strand at 71.356 kb on + strand at 71.356 kb on + strand at 71.357 kb on - strand at 71.357 kb on - strand at 71.360 kb on - strand at 71.411 kb on + strand at 71.412 kb on - strand at 71.442 kb on + strand at 71.468 kb on + strand at 71.530 kb on + strand at 71.531 kb on - strand at 71.542 kb on - strand at 71.687 kb on + strand at 71.804 kb on + strand, within H281DRAFT_01233 at 71.835 kb on + strand, within H281DRAFT_01233 at 71.835 kb on + strand, within H281DRAFT_01233 at 71.836 kb on - strand, within H281DRAFT_01233 at 71.836 kb on - strand, within H281DRAFT_01233 at 71.836 kb on - strand, within H281DRAFT_01233 at 71.836 kb on - strand, within H281DRAFT_01233 at 72.042 kb on + strand at 72.100 kb on + strand, within H281DRAFT_01234 at 72.101 kb on - strand, within H281DRAFT_01234 at 72.148 kb on - strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.192 kb on - strand, within H281DRAFT_01234 at 72.192 kb on - strand, within H281DRAFT_01234
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 69,362 - +0.1 69,395 + +0.5 69,397 + -0.2 69,397 + +0.5 69,398 - -0.7 69,666 + H281DRAFT_01231 0.25 +0.3 69,841 + H281DRAFT_01231 0.76 +0.5 69,842 - H281DRAFT_01231 0.76 +0.2 69,968 - +0.6 70,013 + +0.2 70,015 + +0.1 70,019 + +0.2 70,096 - +0.5 70,367 + H281DRAFT_01232 0.22 +0.2 70,626 + +2.0 70,627 - H281DRAFT_01232 0.42 +1.2 71,058 - H281DRAFT_01232 0.76 +0.1 71,162 + H281DRAFT_01232 0.85 +0.4 71,341 + +0.2 71,351 + -0.1 71,352 - -0.2 71,356 + +0.1 71,356 + +0.5 71,356 + +0.1 71,357 - -0.1 71,357 - +0.3 71,360 - +0.0 71,411 + -0.1 71,412 - -0.3 71,442 + -0.1 71,468 + +0.9 71,530 + -0.1 71,531 - -0.1 71,542 - -0.3 71,687 + -0.3 71,804 + H281DRAFT_01233 0.30 +0.3 71,835 + H281DRAFT_01233 0.41 +0.6 71,835 + H281DRAFT_01233 0.41 +0.0 71,836 - H281DRAFT_01233 0.42 -1.4 71,836 - H281DRAFT_01233 0.42 +0.1 71,836 - H281DRAFT_01233 0.42 -0.1 71,836 - H281DRAFT_01233 0.42 +0.1 72,042 + +0.1 72,100 + H281DRAFT_01234 0.15 +0.2 72,101 - H281DRAFT_01234 0.16 -0.3 72,148 - H281DRAFT_01234 0.31 -0.1 72,191 + H281DRAFT_01234 0.45 +0.5 72,191 + H281DRAFT_01234 0.45 +0.8 72,191 + H281DRAFT_01234 0.45 +0.1 72,192 - H281DRAFT_01234 0.45 +1.2 72,192 - H281DRAFT_01234 0.45 +0.3
Or see this region's nucleotide sequence