Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00808 and H281DRAFT_00809 are separated by 456 nucleotides H281DRAFT_00809 and H281DRAFT_00810 are separated by 161 nucleotides
H281DRAFT_00808: H281DRAFT_00808 - Uncharacterized conserved protein, contains Mth938-like domain, at 896,449 to 896,823
_00808
H281DRAFT_00809: H281DRAFT_00809 - alanine-synthesizing transaminase, at 897,280 to 898,584
_00809
H281DRAFT_00810: H281DRAFT_00810 - homoserine dehydrogenase, at 898,746 to 900,077
_00810
Position (kb) 897
898
899 Strain fitness (log2 ratio) -2
-1
0
1 at 896.418 kb on + strand at 896.418 kb on + strand at 896.418 kb on + strand at 896.507 kb on + strand, within H281DRAFT_00808 at 896.507 kb on + strand, within H281DRAFT_00808 at 896.562 kb on + strand, within H281DRAFT_00808 at 896.563 kb on - strand, within H281DRAFT_00808 at 896.762 kb on + strand, within H281DRAFT_00808 at 896.788 kb on - strand at 896.816 kb on - strand at 896.816 kb on - strand at 897.012 kb on + strand at 897.014 kb on + strand at 897.087 kb on + strand at 897.161 kb on + strand at 897.161 kb on + strand at 897.208 kb on + strand at 897.324 kb on + strand at 897.595 kb on + strand, within H281DRAFT_00809 at 897.595 kb on + strand, within H281DRAFT_00809 at 897.640 kb on + strand, within H281DRAFT_00809 at 897.640 kb on + strand, within H281DRAFT_00809 at 897.781 kb on + strand, within H281DRAFT_00809 at 897.781 kb on + strand, within H281DRAFT_00809 at 897.781 kb on + strand, within H281DRAFT_00809 at 897.898 kb on + strand, within H281DRAFT_00809 at 897.973 kb on + strand, within H281DRAFT_00809 at 897.973 kb on + strand, within H281DRAFT_00809 at 898.005 kb on + strand, within H281DRAFT_00809 at 898.069 kb on + strand, within H281DRAFT_00809 at 898.234 kb on + strand, within H281DRAFT_00809 at 898.354 kb on + strand, within H281DRAFT_00809 at 898.592 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 896,418 + +0.1 896,418 + -0.1 896,418 + +1.3 896,507 + H281DRAFT_00808 0.15 +0.5 896,507 + H281DRAFT_00808 0.15 +0.4 896,562 + H281DRAFT_00808 0.30 +1.0 896,563 - H281DRAFT_00808 0.30 +0.5 896,762 + H281DRAFT_00808 0.83 -0.0 896,788 - -0.3 896,816 - -0.0 896,816 - +0.5 897,012 + +0.8 897,014 + -0.2 897,087 + +0.6 897,161 + +0.0 897,161 + +0.3 897,208 + -0.2 897,324 + +0.9 897,595 + H281DRAFT_00809 0.24 -1.2 897,595 + H281DRAFT_00809 0.24 -1.2 897,640 + H281DRAFT_00809 0.28 -2.0 897,640 + H281DRAFT_00809 0.28 -0.8 897,781 + H281DRAFT_00809 0.38 -1.3 897,781 + H281DRAFT_00809 0.38 -0.6 897,781 + H281DRAFT_00809 0.38 -1.9 897,898 + H281DRAFT_00809 0.47 -0.3 897,973 + H281DRAFT_00809 0.53 +0.2 897,973 + H281DRAFT_00809 0.53 -1.6 898,005 + H281DRAFT_00809 0.56 +0.2 898,069 + H281DRAFT_00809 0.60 -0.8 898,234 + H281DRAFT_00809 0.73 -1.5 898,354 + H281DRAFT_00809 0.82 -0.5 898,592 + -0.4
Or see this region's nucleotide sequence