Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00693 and H281DRAFT_00694 are separated by 0 nucleotides H281DRAFT_00694 and H281DRAFT_00695 are separated by 140 nucleotides H281DRAFT_00695 and H281DRAFT_00696 are separated by 47 nucleotides
H281DRAFT_00693: H281DRAFT_00693 - hypothetical protein, at 774,491 to 774,778
_00693
H281DRAFT_00694: H281DRAFT_00694 - Transcriptional regulator, at 774,779 to 775,441
_00694
H281DRAFT_00695: H281DRAFT_00695 - choline-sulfatase, at 775,582 to 777,012
_00695
H281DRAFT_00696: H281DRAFT_00696 - Predicted arabinose efflux permease, MFS family, at 777,060 to 778,361
_00696
Position (kb) 775
776
777
778 Strain fitness (log2 ratio) -1
0
1 at 775.107 kb on - strand, within H281DRAFT_00694 at 775.771 kb on + strand, within H281DRAFT_00695 at 775.889 kb on - strand, within H281DRAFT_00695 at 776.339 kb on - strand, within H281DRAFT_00695 at 776.488 kb on + strand, within H281DRAFT_00695 at 776.587 kb on - strand, within H281DRAFT_00695 at 776.587 kb on - strand, within H281DRAFT_00695 at 777.434 kb on - strand, within H281DRAFT_00696 at 777.496 kb on - strand, within H281DRAFT_00696 at 777.569 kb on - strand, within H281DRAFT_00696 at 777.721 kb on - strand, within H281DRAFT_00696
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 775,107 - H281DRAFT_00694 0.49 -0.1 775,771 + H281DRAFT_00695 0.13 -1.6 775,889 - H281DRAFT_00695 0.21 +0.4 776,339 - H281DRAFT_00695 0.53 +0.5 776,488 + H281DRAFT_00695 0.63 +0.3 776,587 - H281DRAFT_00695 0.70 +0.9 776,587 - H281DRAFT_00695 0.70 +0.9 777,434 - H281DRAFT_00696 0.29 +0.3 777,496 - H281DRAFT_00696 0.33 +0.1 777,569 - H281DRAFT_00696 0.39 -0.1 777,721 - H281DRAFT_00696 0.51 +0.1
Or see this region's nucleotide sequence