Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00351 and H281DRAFT_00352 are separated by 375 nucleotides H281DRAFT_00352 and H281DRAFT_00353 overlap by 28 nucleotides H281DRAFT_00353 and H281DRAFT_00354 are separated by 80 nucleotides
H281DRAFT_00351: H281DRAFT_00351 - Heme-degrading monooxygenase HmoA, at 384,241 to 384,915
_00351
H281DRAFT_00352: H281DRAFT_00352 - transcriptional regulator, LysR family, at 385,291 to 386,211
_00352
H281DRAFT_00353: H281DRAFT_00353 - G/U mismatch-specific uracil-DNA glycosylase, at 386,184 to 386,630
_00353
H281DRAFT_00354: H281DRAFT_00354 - transcriptional regulator, AraC family with amidase-like domain, at 386,711 to 387,736
_00354
Position (kb) 385
386
387 Strain fitness (log2 ratio) -1
0
1 at 384.892 kb on + strand at 385.133 kb on + strand at 385.134 kb on - strand at 385.137 kb on + strand at 385.515 kb on + strand, within H281DRAFT_00352 at 385.801 kb on + strand, within H281DRAFT_00352 at 386.246 kb on + strand, within H281DRAFT_00353 at 386.383 kb on + strand, within H281DRAFT_00353 at 386.436 kb on + strand, within H281DRAFT_00353 at 386.641 kb on - strand at 386.674 kb on - strand at 386.718 kb on + strand at 386.758 kb on + strand at 386.932 kb on + strand, within H281DRAFT_00354 at 387.060 kb on - strand, within H281DRAFT_00354 at 387.075 kb on + strand, within H281DRAFT_00354 at 387.165 kb on + strand, within H281DRAFT_00354 at 387.165 kb on + strand, within H281DRAFT_00354 at 387.165 kb on + strand, within H281DRAFT_00354 at 387.168 kb on - strand, within H281DRAFT_00354 at 387.168 kb on - strand, within H281DRAFT_00354
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 384,892 + +0.6 385,133 + -0.0 385,134 - +0.6 385,137 + +0.4 385,515 + H281DRAFT_00352 0.24 +0.9 385,801 + H281DRAFT_00352 0.55 +0.1 386,246 + H281DRAFT_00353 0.14 +0.3 386,383 + H281DRAFT_00353 0.45 +0.0 386,436 + H281DRAFT_00353 0.56 +0.4 386,641 - -1.2 386,674 - -0.3 386,718 + +0.1 386,758 + -0.1 386,932 + H281DRAFT_00354 0.22 +0.4 387,060 - H281DRAFT_00354 0.34 -0.2 387,075 + H281DRAFT_00354 0.35 +0.0 387,165 + H281DRAFT_00354 0.44 -0.6 387,165 + H281DRAFT_00354 0.44 +0.3 387,165 + H281DRAFT_00354 0.44 -0.1 387,168 - H281DRAFT_00354 0.45 -0.1 387,168 - H281DRAFT_00354 0.45 -0.0
Or see this region's nucleotide sequence