Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00245 and H281DRAFT_00246 are separated by 178 nucleotides H281DRAFT_00246 and H281DRAFT_00247 are separated by 159 nucleotides H281DRAFT_00247 and H281DRAFT_00248 are separated by 222 nucleotides
H281DRAFT_00245: H281DRAFT_00245 - MFS transporter, DHA2 family, multidrug resistance protein, at 262,591 to 264,039
_00245
H281DRAFT_00246: H281DRAFT_00246 - phospholipid-binding protein, PBP family, at 264,218 to 264,721
_00246
H281DRAFT_00247: H281DRAFT_00247 - T/G mismatch-specific endonuclease, at 264,881 to 265,327
_00247
H281DRAFT_00248: H281DRAFT_00248 - hypothetical protein, at 265,550 to 265,981
_00248
Position (kb) 264
265 Strain fitness (log2 ratio) -1
0
1
2
3 at 263.715 kb on - strand at 264.268 kb on + strand at 264.355 kb on - strand, within H281DRAFT_00246 at 264.412 kb on - strand, within H281DRAFT_00246 at 264.654 kb on + strand, within H281DRAFT_00246 at 264.655 kb on - strand, within H281DRAFT_00246 at 264.722 kb on + strand at 264.722 kb on + strand at 264.722 kb on + strand at 264.874 kb on + strand at 264.951 kb on - strand, within H281DRAFT_00247 at 265.693 kb on - strand, within H281DRAFT_00248
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 263,715 - +2.8 264,268 + +0.5 264,355 - H281DRAFT_00246 0.27 +0.2 264,412 - H281DRAFT_00246 0.38 +0.5 264,654 + H281DRAFT_00246 0.87 +0.1 264,655 - H281DRAFT_00246 0.87 +0.5 264,722 + -0.5 264,722 + +0.1 264,722 + +0.4 264,874 + -0.5 264,951 - H281DRAFT_00247 0.16 -0.1 265,693 - H281DRAFT_00248 0.33 +1.3
Or see this region's nucleotide sequence