Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00108 and H281DRAFT_00109 are separated by 30 nucleotides H281DRAFT_00109 and H281DRAFT_00110 are separated by 62 nucleotides
H281DRAFT_00108: H281DRAFT_00108 - Predicted dehydrogenase, at 113,024 to 114,175
_00108
H281DRAFT_00109: H281DRAFT_00109 - hypothetical protein, at 114,206 to 114,466
_00109
H281DRAFT_00110: H281DRAFT_00110 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 114,529 to 117,723
_00110
Position (kb) 114
115 Strain fitness (log2 ratio) -1
0
1 at 113.425 kb on + strand, within H281DRAFT_00108 at 113.425 kb on + strand, within H281DRAFT_00108 at 113.425 kb on + strand, within H281DRAFT_00108 at 113.425 kb on + strand, within H281DRAFT_00108 at 113.430 kb on - strand, within H281DRAFT_00108 at 113.493 kb on + strand, within H281DRAFT_00108 at 113.772 kb on + strand, within H281DRAFT_00108 at 113.773 kb on - strand, within H281DRAFT_00108 at 113.811 kb on + strand, within H281DRAFT_00108 at 114.005 kb on + strand, within H281DRAFT_00108 at 114.008 kb on - strand, within H281DRAFT_00108 at 114.285 kb on + strand, within H281DRAFT_00109 at 114.286 kb on - strand, within H281DRAFT_00109 at 114.286 kb on - strand, within H281DRAFT_00109 at 114.495 kb on + strand at 114.630 kb on + strand at 114.744 kb on + strand at 114.745 kb on - strand at 114.745 kb on - strand at 114.973 kb on - strand, within H281DRAFT_00110 at 114.973 kb on - strand, within H281DRAFT_00110 at 115.041 kb on - strand, within H281DRAFT_00110
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 113,425 + H281DRAFT_00108 0.35 -0.0 113,425 + H281DRAFT_00108 0.35 -0.4 113,425 + H281DRAFT_00108 0.35 +0.0 113,425 + H281DRAFT_00108 0.35 +0.5 113,430 - H281DRAFT_00108 0.35 +0.6 113,493 + H281DRAFT_00108 0.41 +0.4 113,772 + H281DRAFT_00108 0.65 +0.3 113,773 - H281DRAFT_00108 0.65 +0.4 113,811 + H281DRAFT_00108 0.68 +0.1 114,005 + H281DRAFT_00108 0.85 +0.1 114,008 - H281DRAFT_00108 0.85 +0.3 114,285 + H281DRAFT_00109 0.30 -0.4 114,286 - H281DRAFT_00109 0.31 -1.1 114,286 - H281DRAFT_00109 0.31 -0.2 114,495 + -0.2 114,630 + +0.2 114,744 + +0.4 114,745 - -0.8 114,745 - +1.1 114,973 - H281DRAFT_00110 0.14 -0.8 114,973 - H281DRAFT_00110 0.14 -0.5 115,041 - H281DRAFT_00110 0.16 +1.0
Or see this region's nucleotide sequence