Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3372 and Dsui_3373 are separated by 16 nucleotides Dsui_3373 and Dsui_3374 are separated by 20 nucleotides Dsui_3374 and Dsui_3375 are separated by 143 nucleotides Dsui_3375 and Dsui_3376 are separated by 180 nucleotides
Dsui_3372: Dsui_3372 - hypothetical protein, at 3,613,262 to 3,615,406
_3372
Dsui_3373: Dsui_3373 - Na+/phosphate symporter, at 3,615,423 to 3,617,114
_3373
Dsui_3374: Dsui_3374 - cyclic nucleotide-binding protein, at 3,617,135 to 3,617,500
_3374
Dsui_3375: Dsui_3375 - hypothetical protein, at 3,617,644 to 3,617,820
_3375
Dsui_3376: Dsui_3376 - aspartate/tyrosine/aromatic aminotransferase, at 3,618,001 to 3,619,167
_3376
Position (kb)
3615
3616
3617
3618 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3614.438 kb on - strand, within Dsui_3372 at 3614.545 kb on + strand, within Dsui_3372 at 3614.717 kb on - strand, within Dsui_3372 at 3614.834 kb on - strand, within Dsui_3372 at 3614.889 kb on - strand, within Dsui_3372 at 3615.028 kb on - strand, within Dsui_3372 at 3615.029 kb on - strand at 3615.096 kb on - strand, within Dsui_3372 at 3615.120 kb on + strand, within Dsui_3372 at 3615.162 kb on + strand, within Dsui_3372 at 3615.288 kb on + strand at 3615.304 kb on + strand at 3615.379 kb on - strand at 3615.514 kb on + strand at 3615.573 kb on + strand at 3615.775 kb on + strand, within Dsui_3373 at 3615.807 kb on + strand, within Dsui_3373 at 3615.844 kb on + strand, within Dsui_3373 at 3616.024 kb on + strand, within Dsui_3373 at 3616.102 kb on + strand at 3616.241 kb on + strand, within Dsui_3373 at 3616.260 kb on + strand, within Dsui_3373 at 3616.327 kb on + strand, within Dsui_3373 at 3616.481 kb on + strand, within Dsui_3373 at 3616.568 kb on - strand, within Dsui_3373 at 3616.576 kb on + strand, within Dsui_3373 at 3616.584 kb on - strand, within Dsui_3373 at 3616.584 kb on - strand at 3616.603 kb on - strand at 3616.704 kb on + strand, within Dsui_3373 at 3616.716 kb on + strand, within Dsui_3373 at 3616.716 kb on + strand, within Dsui_3373 at 3616.745 kb on + strand, within Dsui_3373 at 3616.835 kb on - strand, within Dsui_3373 at 3616.949 kb on + strand at 3617.150 kb on - strand at 3617.208 kb on + strand, within Dsui_3374 at 3617.208 kb on + strand, within Dsui_3374 at 3617.247 kb on - strand at 3617.335 kb on + strand, within Dsui_3374 at 3617.354 kb on + strand, within Dsui_3374 at 3617.367 kb on + strand, within Dsui_3374 at 3617.428 kb on - strand at 3617.531 kb on + strand at 3617.769 kb on - strand, within Dsui_3375
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 3,614,438 - Dsui_3372 0.55 +0.7 3,614,545 + Dsui_3372 0.60 +0.0 3,614,717 - Dsui_3372 0.68 -0.3 3,614,834 - Dsui_3372 0.73 -2.4 3,614,889 - Dsui_3372 0.76 +0.7 3,615,028 - Dsui_3372 0.82 -0.3 3,615,029 - +0.7 3,615,096 - Dsui_3372 0.86 -0.3 3,615,120 + Dsui_3372 0.87 -0.6 3,615,162 + Dsui_3372 0.89 -0.4 3,615,288 + -0.2 3,615,304 + -0.6 3,615,379 - +0.7 3,615,514 + -0.3 3,615,573 + +1.7 3,615,775 + Dsui_3373 0.21 -1.0 3,615,807 + Dsui_3373 0.23 -1.3 3,615,844 + Dsui_3373 0.25 -0.3 3,616,024 + Dsui_3373 0.36 -0.9 3,616,102 + +0.7 3,616,241 + Dsui_3373 0.48 +0.7 3,616,260 + Dsui_3373 0.49 -1.3 3,616,327 + Dsui_3373 0.53 -0.3 3,616,481 + Dsui_3373 0.63 -3.1 3,616,568 - Dsui_3373 0.68 -1.3 3,616,576 + Dsui_3373 0.68 -0.0 3,616,584 - Dsui_3373 0.69 +0.7 3,616,584 - +0.7 3,616,603 - +0.7 3,616,704 + Dsui_3373 0.76 -1.3 3,616,716 + Dsui_3373 0.76 -0.6 3,616,716 + Dsui_3373 0.76 -1.0 3,616,745 + Dsui_3373 0.78 -0.9 3,616,835 - Dsui_3373 0.83 -0.3 3,616,949 + -0.9 3,617,150 - -2.4 3,617,208 + Dsui_3374 0.20 -0.9 3,617,208 + Dsui_3374 0.20 -0.3 3,617,247 - +0.7 3,617,335 + Dsui_3374 0.55 +1.1 3,617,354 + Dsui_3374 0.60 -1.9 3,617,367 + Dsui_3374 0.63 -0.8 3,617,428 - +0.7 3,617,531 + -1.9 3,617,769 - Dsui_3375 0.71 -0.1
Or see this region's nucleotide sequence