Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3369 and Dsui_3370 are separated by 49 nucleotides Dsui_3370 and Dsui_3371 are separated by 207 nucleotides Dsui_3371 and Dsui_3372 are separated by 154 nucleotides
Dsui_3369: Dsui_3369 - acyl-CoA dehydrogenase, at 3,610,182 to 3,611,366
_3369
Dsui_3370: Dsui_3370 - hypothetical protein, at 3,611,416 to 3,611,847
_3370
Dsui_3371: Dsui_3371 - putative oxidoreductase, aryl-alcohol dehydrogenase like protein, at 3,612,055 to 3,613,107
_3371
Dsui_3372: Dsui_3372 - hypothetical protein, at 3,613,262 to 3,615,406
_3372
Position (kb)
3612
3613
3614 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3611.132 kb on + strand, within Dsui_3369 at 3611.207 kb on - strand at 3611.266 kb on + strand at 3611.317 kb on + strand at 3611.317 kb on + strand at 3611.340 kb on - strand at 3611.342 kb on - strand at 3611.372 kb on + strand at 3611.373 kb on + strand at 3611.463 kb on - strand, within Dsui_3370 at 3611.485 kb on - strand at 3611.489 kb on - strand, within Dsui_3370 at 3611.536 kb on + strand, within Dsui_3370 at 3611.556 kb on - strand, within Dsui_3370 at 3611.616 kb on + strand, within Dsui_3370 at 3611.629 kb on + strand, within Dsui_3370 at 3611.637 kb on - strand, within Dsui_3370 at 3611.648 kb on + strand, within Dsui_3370 at 3611.677 kb on + strand, within Dsui_3370 at 3611.700 kb on + strand, within Dsui_3370 at 3611.753 kb on - strand, within Dsui_3370 at 3611.781 kb on - strand, within Dsui_3370 at 3611.849 kb on - strand at 3611.985 kb on - strand at 3612.071 kb on + strand at 3612.082 kb on + strand at 3612.133 kb on - strand at 3612.221 kb on - strand, within Dsui_3371 at 3612.483 kb on + strand, within Dsui_3371 at 3612.491 kb on - strand, within Dsui_3371 at 3612.498 kb on + strand at 3612.498 kb on + strand, within Dsui_3371 at 3612.506 kb on - strand, within Dsui_3371 at 3612.557 kb on + strand, within Dsui_3371 at 3612.570 kb on + strand at 3612.623 kb on - strand, within Dsui_3371 at 3612.624 kb on + strand, within Dsui_3371 at 3612.652 kb on - strand, within Dsui_3371 at 3612.710 kb on + strand at 3612.718 kb on - strand, within Dsui_3371 at 3612.729 kb on + strand at 3612.955 kb on - strand, within Dsui_3371 at 3613.043 kb on - strand at 3613.101 kb on + strand at 3613.109 kb on - strand at 3613.121 kb on - strand at 3613.124 kb on - strand at 3613.156 kb on + strand at 3613.156 kb on + strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.218 kb on + strand at 3613.269 kb on + strand at 3613.398 kb on - strand at 3613.436 kb on - strand at 3613.438 kb on + strand at 3613.470 kb on + strand at 3613.526 kb on + strand, within Dsui_3372 at 3613.627 kb on - strand, within Dsui_3372 at 3613.638 kb on - strand, within Dsui_3372 at 3613.669 kb on - strand, within Dsui_3372 at 3613.669 kb on - strand, within Dsui_3372 at 3614.105 kb on + strand, within Dsui_3372
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 3,611,132 + Dsui_3369 0.80 +0.5 3,611,207 - -0.3 3,611,266 + -2.1 3,611,317 + -0.5 3,611,317 + +0.3 3,611,340 - -1.9 3,611,342 - -2.4 3,611,372 + -0.7 3,611,373 + -0.9 3,611,463 - Dsui_3370 0.11 -0.9 3,611,485 - +0.7 3,611,489 - Dsui_3370 0.17 -0.3 3,611,536 + Dsui_3370 0.28 -0.2 3,611,556 - Dsui_3370 0.32 +0.7 3,611,616 + Dsui_3370 0.46 +0.5 3,611,629 + Dsui_3370 0.49 -0.0 3,611,637 - Dsui_3370 0.51 -0.3 3,611,648 + Dsui_3370 0.54 +0.0 3,611,677 + Dsui_3370 0.60 +0.0 3,611,700 + Dsui_3370 0.66 +0.0 3,611,753 - Dsui_3370 0.78 -0.3 3,611,781 - Dsui_3370 0.84 -0.3 3,611,849 - -2.1 3,611,985 - -0.3 3,612,071 + -0.3 3,612,082 + +0.7 3,612,133 - -0.4 3,612,221 - Dsui_3371 0.16 -2.1 3,612,483 + Dsui_3371 0.41 +0.7 3,612,491 - Dsui_3371 0.41 -1.6 3,612,498 + +0.7 3,612,498 + Dsui_3371 0.42 -2.1 3,612,506 - Dsui_3371 0.43 -2.6 3,612,557 + Dsui_3371 0.48 -0.3 3,612,570 + +0.7 3,612,623 - Dsui_3371 0.54 -0.9 3,612,624 + Dsui_3371 0.54 -0.9 3,612,652 - Dsui_3371 0.57 -0.3 3,612,710 + -0.3 3,612,718 - Dsui_3371 0.63 -0.3 3,612,729 + +0.7 3,612,955 - Dsui_3371 0.85 -0.9 3,613,043 - +0.7 3,613,101 + -0.3 3,613,109 - -1.9 3,613,121 - +0.7 3,613,124 - -0.3 3,613,156 + -0.9 3,613,156 + +0.7 3,613,164 - +0.7 3,613,164 - -0.9 3,613,164 - +0.7 3,613,164 - -0.3 3,613,164 - +0.7 3,613,218 + -0.5 3,613,269 + -0.2 3,613,398 - -1.3 3,613,436 - +0.7 3,613,438 + -3.2 3,613,470 + -0.2 3,613,526 + Dsui_3372 0.12 -0.6 3,613,627 - Dsui_3372 0.17 -0.3 3,613,638 - Dsui_3372 0.18 +0.7 3,613,669 - Dsui_3372 0.19 +0.7 3,613,669 - Dsui_3372 0.19 -0.3 3,614,105 + Dsui_3372 0.39 -0.5
Or see this region's nucleotide sequence