Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2694 and Dsui_2695 are separated by 326 nucleotides Dsui_2695 and Dsui_2696 are separated by 5 nucleotides
Dsui_2694: Dsui_2694 - ribosomal protein S2, at 2,845,815 to 2,846,564
_2694
Dsui_2695: Dsui_2695 - methionine aminopeptidase, type I, at 2,846,891 to 2,847,688
_2695
Dsui_2696: Dsui_2696 - (protein-PII) uridylyltransferase, at 2,847,694 to 2,850,285
_2696
Position (kb)
2846
2847
2848 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2845.898 kb on - strand, within Dsui_2694 at 2846.830 kb on + strand at 2846.830 kb on + strand at 2846.830 kb on + strand at 2846.844 kb on - strand at 2846.847 kb on + strand at 2846.847 kb on + strand at 2846.860 kb on + strand at 2846.871 kb on + strand at 2846.982 kb on + strand, within Dsui_2695 at 2846.984 kb on - strand, within Dsui_2695 at 2847.065 kb on + strand, within Dsui_2695 at 2847.126 kb on + strand, within Dsui_2695 at 2847.134 kb on - strand, within Dsui_2695 at 2847.210 kb on - strand at 2847.229 kb on - strand, within Dsui_2695 at 2847.254 kb on + strand, within Dsui_2695 at 2847.317 kb on - strand, within Dsui_2695 at 2847.319 kb on + strand, within Dsui_2695 at 2847.337 kb on + strand, within Dsui_2695 at 2847.449 kb on + strand, within Dsui_2695 at 2847.450 kb on - strand, within Dsui_2695 at 2847.466 kb on + strand, within Dsui_2695 at 2847.494 kb on + strand, within Dsui_2695 at 2847.515 kb on - strand, within Dsui_2695 at 2847.644 kb on - strand at 2847.649 kb on - strand at 2847.667 kb on + strand at 2847.696 kb on + strand at 2847.715 kb on + strand at 2847.830 kb on + strand at 2847.838 kb on - strand at 2847.878 kb on + strand at 2847.918 kb on + strand at 2848.053 kb on - strand at 2848.115 kb on - strand, within Dsui_2696 at 2848.175 kb on + strand, within Dsui_2696 at 2848.191 kb on - strand, within Dsui_2696 at 2848.226 kb on - strand, within Dsui_2696 at 2848.299 kb on + strand, within Dsui_2696 at 2848.306 kb on - strand, within Dsui_2696 at 2848.338 kb on + strand at 2848.362 kb on - strand, within Dsui_2696 at 2848.438 kb on + strand, within Dsui_2696 at 2848.601 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,845,898 - Dsui_2694 0.11 -0.5 2,846,830 + +0.8 2,846,830 + -1.2 2,846,830 + +0.8 2,846,844 - -0.7 2,846,847 + +0.8 2,846,847 + -0.7 2,846,860 + -1.6 2,846,871 + -0.2 2,846,982 + Dsui_2695 0.11 -3.0 2,846,984 - Dsui_2695 0.12 -0.2 2,847,065 + Dsui_2695 0.22 -2.4 2,847,126 + Dsui_2695 0.29 -1.6 2,847,134 - Dsui_2695 0.30 -0.2 2,847,210 - +0.8 2,847,229 - Dsui_2695 0.42 -0.2 2,847,254 + Dsui_2695 0.45 -2.1 2,847,317 - Dsui_2695 0.53 +0.8 2,847,319 + Dsui_2695 0.54 -2.1 2,847,337 + Dsui_2695 0.56 -2.5 2,847,449 + Dsui_2695 0.70 -2.3 2,847,450 - Dsui_2695 0.70 -1.7 2,847,466 + Dsui_2695 0.72 -1.8 2,847,494 + Dsui_2695 0.76 -1.8 2,847,515 - Dsui_2695 0.78 +0.8 2,847,644 - -0.2 2,847,649 - -0.2 2,847,667 + -0.2 2,847,696 + -0.3 2,847,715 + -0.3 2,847,830 + -0.5 2,847,838 - +0.8 2,847,878 + -0.5 2,847,918 + -0.3 2,848,053 - +0.8 2,848,115 - Dsui_2696 0.16 -0.2 2,848,175 + Dsui_2696 0.19 -0.3 2,848,191 - Dsui_2696 0.19 +0.8 2,848,226 - Dsui_2696 0.21 +0.8 2,848,299 + Dsui_2696 0.23 -1.1 2,848,306 - Dsui_2696 0.24 -0.8 2,848,338 + +0.4 2,848,362 - Dsui_2696 0.26 +0.8 2,848,438 + Dsui_2696 0.29 +0.5 2,848,601 - +0.8
Or see this region's nucleotide sequence