Strain Fitness in Dechlorosoma suillum PS around Dsui_2669

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2668 and Dsui_2669 are separated by 115 nucleotidesDsui_2669 and Dsui_2670 are separated by 89 nucleotides Dsui_2668: Dsui_2668 - putative phosphatase, at 2,819,444 to 2,821,390 _2668 Dsui_2669: Dsui_2669 - ankyrin repeat-containing protein, at 2,821,506 to 2,822,252 _2669 Dsui_2670: Dsui_2670 - GMP synthase (glutamine-hydrolyzing), at 2,822,342 to 2,823,976 _2670 Position (kb) 2821 2822 2823Strain fitness (log2 ratio) -2 -1 0 1at 2820.622 kb on - strandat 2820.653 kb on + strand, within Dsui_2668at 2820.653 kb on + strandat 2820.665 kb on + strandat 2820.666 kb on - strandat 2820.692 kb on + strandat 2821.125 kb on + strandat 2821.339 kb on + strandat 2821.546 kb on + strandat 2821.638 kb on - strandat 2821.655 kb on + strand, within Dsui_2669at 2821.824 kb on + strand, within Dsui_2669at 2821.831 kb on + strand, within Dsui_2669at 2821.831 kb on + strand, within Dsui_2669at 2821.831 kb on + strand, within Dsui_2669at 2821.831 kb on + strand, within Dsui_2669at 2821.893 kb on - strand, within Dsui_2669at 2821.924 kb on + strand, within Dsui_2669at 2821.924 kb on + strand, within Dsui_2669at 2821.924 kb on + strand, within Dsui_2669at 2821.929 kb on + strand, within Dsui_2669at 2822.075 kb on - strandat 2822.135 kb on - strand, within Dsui_2669at 2822.135 kb on - strand, within Dsui_2669at 2822.185 kb on - strandat 2822.241 kb on + strandat 2822.303 kb on + strandat 2822.311 kb on - strandat 2822.311 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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2,820,622 - +0.8
2,820,653 + Dsui_2668 0.62 -0.2
2,820,653 + +0.8
2,820,665 + -0.8
2,820,666 - -1.2
2,820,692 + -0.2
2,821,125 + +0.8
2,821,339 + -0.2
2,821,546 + -2.2
2,821,638 - +0.8
2,821,655 + Dsui_2669 0.20 -0.2
2,821,824 + Dsui_2669 0.43 -1.6
2,821,831 + Dsui_2669 0.44 -2.2
2,821,831 + Dsui_2669 0.44 +0.4
2,821,831 + Dsui_2669 0.44 -2.2
2,821,831 + Dsui_2669 0.44 -0.8
2,821,893 - Dsui_2669 0.52 -0.8
2,821,924 + Dsui_2669 0.56 -1.2
2,821,924 + Dsui_2669 0.56 -1.2
2,821,924 + Dsui_2669 0.56 -0.2
2,821,929 + Dsui_2669 0.57 -1.8
2,822,075 - +0.8
2,822,135 - Dsui_2669 0.84 +0.8
2,822,135 - Dsui_2669 0.84 -0.8
2,822,185 - +0.8
2,822,241 + -0.5
2,822,303 + +0.8
2,822,311 - -0.1
2,822,311 - +0.0

Or see this region's nucleotide sequence