Strain Fitness in Dechlorosoma suillum PS around Dsui_2635

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2634 and Dsui_2635 overlap by 4 nucleotidesDsui_2635 and Dsui_2636 are separated by 11 nucleotides Dsui_2634: Dsui_2634 - cytochrome c, mono- and diheme variants family, at 2,784,698 to 2,785,084 _2634 Dsui_2635: Dsui_2635 - heavy metal efflux pump, cobalt-zinc-cadmium, at 2,785,081 to 2,788,215 _2635 Dsui_2636: Dsui_2636 - RND family efflux transporter, MFP subunit, at 2,788,227 to 2,789,816 _2636 Position (kb) 2785 2786 2787 2788 2789Strain fitness (log2 ratio) -2 -1 0 1at 2784.084 kb on - strandat 2784.092 kb on + strandat 2784.100 kb on - strandat 2784.100 kb on - strandat 2784.144 kb on + strandat 2784.157 kb on - strandat 2784.159 kb on + strandat 2784.159 kb on + strandat 2784.215 kb on - strandat 2784.217 kb on - strandat 2784.359 kb on + strandat 2784.472 kb on - strandat 2784.509 kb on - strandat 2784.553 kb on - strandat 2784.711 kb on + strandat 2785.004 kb on + strand, within Dsui_2634at 2785.010 kb on + strand, within Dsui_2634at 2785.029 kb on - strand, within Dsui_2634at 2785.029 kb on - strand, within Dsui_2634at 2785.217 kb on - strandat 2785.320 kb on + strandat 2785.473 kb on + strand, within Dsui_2635at 2785.474 kb on - strand, within Dsui_2635at 2785.547 kb on - strand, within Dsui_2635at 2785.588 kb on + strand, within Dsui_2635at 2785.773 kb on - strand, within Dsui_2635at 2785.773 kb on - strand, within Dsui_2635at 2785.881 kb on + strand, within Dsui_2635at 2785.984 kb on + strand, within Dsui_2635at 2786.046 kb on - strand, within Dsui_2635at 2786.121 kb on - strand, within Dsui_2635at 2786.121 kb on - strand, within Dsui_2635at 2786.175 kb on - strand, within Dsui_2635at 2786.195 kb on - strand, within Dsui_2635at 2786.278 kb on + strand, within Dsui_2635at 2786.280 kb on + strand, within Dsui_2635at 2786.408 kb on + strand, within Dsui_2635at 2786.427 kb on - strand, within Dsui_2635at 2786.522 kb on + strand, within Dsui_2635at 2786.677 kb on - strand, within Dsui_2635at 2786.677 kb on - strand, within Dsui_2635at 2786.750 kb on - strand, within Dsui_2635at 2786.764 kb on + strand, within Dsui_2635at 2786.803 kb on + strand, within Dsui_2635at 2786.811 kb on - strand, within Dsui_2635at 2786.870 kb on + strand, within Dsui_2635at 2786.877 kb on + strand, within Dsui_2635at 2786.900 kb on - strand, within Dsui_2635at 2786.905 kb on - strand, within Dsui_2635at 2786.984 kb on - strand, within Dsui_2635at 2787.029 kb on - strand, within Dsui_2635at 2787.247 kb on + strand, within Dsui_2635at 2787.247 kb on + strand, within Dsui_2635at 2787.247 kb on + strand, within Dsui_2635at 2787.247 kb on + strand, within Dsui_2635at 2787.247 kb on + strand, within Dsui_2635at 2787.255 kb on - strand, within Dsui_2635at 2787.255 kb on - strand, within Dsui_2635at 2787.255 kb on - strand, within Dsui_2635at 2787.280 kb on - strand, within Dsui_2635at 2787.397 kb on + strand, within Dsui_2635at 2787.453 kb on + strand, within Dsui_2635at 2787.565 kb on + strand, within Dsui_2635at 2787.739 kb on + strand, within Dsui_2635at 2787.767 kb on + strand, within Dsui_2635at 2787.813 kb on - strand, within Dsui_2635at 2787.845 kb on + strand, within Dsui_2635at 2787.936 kb on + strandat 2787.967 kb on + strandat 2788.078 kb on - strandat 2788.250 kb on - strandat 2788.621 kb on + strand, within Dsui_2636at 2788.707 kb on - strand, within Dsui_2636at 2788.780 kb on + strandat 2788.936 kb on - strand, within Dsui_2636at 2788.962 kb on + strand, within Dsui_2636at 2788.963 kb on + strand, within Dsui_2636at 2788.971 kb on - strand, within Dsui_2636at 2788.971 kb on - strand, within Dsui_2636at 2788.971 kb on - strand, within Dsui_2636at 2788.971 kb on - strand, within Dsui_2636at 2788.971 kb on - strand, within Dsui_2636at 2788.983 kb on - strand, within Dsui_2636at 2789.152 kb on + strand, within Dsui_2636at 2789.160 kb on - strand, within Dsui_2636at 2789.160 kb on - strand, within Dsui_2636

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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2,784,084 - +0.8
2,784,092 + -1.6
2,784,100 - +0.8
2,784,100 - +0.8
2,784,144 + -1.2
2,784,157 - +0.8
2,784,159 + +0.8
2,784,159 + +0.8
2,784,215 - -0.2
2,784,217 - -0.2
2,784,359 + -0.8
2,784,472 - -1.6
2,784,509 - -1.2
2,784,553 - -1.2
2,784,711 + +0.8
2,785,004 + Dsui_2634 0.79 -0.2
2,785,010 + Dsui_2634 0.81 +0.8
2,785,029 - Dsui_2634 0.86 -0.2
2,785,029 - Dsui_2634 0.86 -0.2
2,785,217 - +0.8
2,785,320 + +0.8
2,785,473 + Dsui_2635 0.13 -0.8
2,785,474 - Dsui_2635 0.13 +0.8
2,785,547 - Dsui_2635 0.15 -0.8
2,785,588 + Dsui_2635 0.16 +0.8
2,785,773 - Dsui_2635 0.22 -0.2
2,785,773 - Dsui_2635 0.22 +0.8
2,785,881 + Dsui_2635 0.26 -0.8
2,785,984 + Dsui_2635 0.29 -0.2
2,786,046 - Dsui_2635 0.31 +0.8
2,786,121 - Dsui_2635 0.33 -1.6
2,786,121 - Dsui_2635 0.33 -0.6
2,786,175 - Dsui_2635 0.35 -1.2
2,786,195 - Dsui_2635 0.36 -0.8
2,786,278 + Dsui_2635 0.38 +0.8
2,786,280 + Dsui_2635 0.38 +0.8
2,786,408 + Dsui_2635 0.42 -0.2
2,786,427 - Dsui_2635 0.43 +0.8
2,786,522 + Dsui_2635 0.46 +0.8
2,786,677 - Dsui_2635 0.51 -2.0
2,786,677 - Dsui_2635 0.51 +0.8
2,786,750 - Dsui_2635 0.53 -0.2
2,786,764 + Dsui_2635 0.54 -0.2
2,786,803 + Dsui_2635 0.55 +0.8
2,786,811 - Dsui_2635 0.55 +0.8
2,786,870 + Dsui_2635 0.57 -1.6
2,786,877 + Dsui_2635 0.57 +0.8
2,786,900 - Dsui_2635 0.58 -0.2
2,786,905 - Dsui_2635 0.58 -0.8
2,786,984 - Dsui_2635 0.61 -1.6
2,787,029 - Dsui_2635 0.62 -0.8
2,787,247 + Dsui_2635 0.69 +0.8
2,787,247 + Dsui_2635 0.69 -0.2
2,787,247 + Dsui_2635 0.69 -1.2
2,787,247 + Dsui_2635 0.69 -0.2
2,787,247 + Dsui_2635 0.69 +0.8
2,787,255 - Dsui_2635 0.69 +0.8
2,787,255 - Dsui_2635 0.69 +0.8
2,787,255 - Dsui_2635 0.69 -1.2
2,787,280 - Dsui_2635 0.70 -0.2
2,787,397 + Dsui_2635 0.74 -0.2
2,787,453 + Dsui_2635 0.76 -0.2
2,787,565 + Dsui_2635 0.79 +0.8
2,787,739 + Dsui_2635 0.85 +0.8
2,787,767 + Dsui_2635 0.86 +0.8
2,787,813 - Dsui_2635 0.87 -0.2
2,787,845 + Dsui_2635 0.88 +0.8
2,787,936 + +0.8
2,787,967 + +0.8
2,788,078 - -0.8
2,788,250 - +0.8
2,788,621 + Dsui_2636 0.25 +0.8
2,788,707 - Dsui_2636 0.30 -0.8
2,788,780 + +0.8
2,788,936 - Dsui_2636 0.45 -0.2
2,788,962 + Dsui_2636 0.46 +0.8
2,788,963 + Dsui_2636 0.46 +0.8
2,788,971 - Dsui_2636 0.47 -0.8
2,788,971 - Dsui_2636 0.47 -0.2
2,788,971 - Dsui_2636 0.47 -1.6
2,788,971 - Dsui_2636 0.47 -0.8
2,788,971 - Dsui_2636 0.47 -0.2
2,788,983 - Dsui_2636 0.48 -1.8
2,789,152 + Dsui_2636 0.58 -0.2
2,789,160 - Dsui_2636 0.59 -0.8
2,789,160 - Dsui_2636 0.59 +0.8

Or see this region's nucleotide sequence