Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2617 and Dsui_2618 are separated by 18 nucleotides Dsui_2618 and Dsui_2619 are separated by 40 nucleotides Dsui_2619 and Dsui_2620 are separated by 4 nucleotides Dsui_2620 and Dsui_2621 are separated by 128 nucleotides
Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168
_2617
Dsui_2618: Dsui_2618 - putative transcriptional regulator, at 2,771,187 to 2,771,405
_2618
Dsui_2619: Dsui_2619 - hypothetical protein, at 2,771,446 to 2,771,676
_2619
Dsui_2620: Dsui_2620 - hypothetical protein, at 2,771,681 to 2,773,621
_2620
Dsui_2621: Dsui_2621 - ATPase involved in chromosome partitioning, at 2,773,750 to 2,774,658
_2621
Position (kb)
2771
2772
2773
2774 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2771.592 kb on + strand, within Dsui_2619 at 2771.730 kb on + strand at 2771.730 kb on + strand at 2771.735 kb on + strand at 2771.790 kb on - strand at 2771.803 kb on + strand at 2771.906 kb on - strand, within Dsui_2620 at 2772.105 kb on - strand, within Dsui_2620 at 2772.213 kb on + strand, within Dsui_2620 at 2772.251 kb on + strand, within Dsui_2620 at 2772.341 kb on + strand, within Dsui_2620 at 2772.450 kb on - strand, within Dsui_2620 at 2772.456 kb on - strand, within Dsui_2620 at 2772.467 kb on - strand, within Dsui_2620 at 2772.542 kb on + strand, within Dsui_2620 at 2772.610 kb on - strand, within Dsui_2620 at 2772.616 kb on + strand at 2772.636 kb on + strand, within Dsui_2620 at 2772.644 kb on - strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620 at 2772.816 kb on + strand, within Dsui_2620 at 2772.819 kb on + strand, within Dsui_2620 at 2772.824 kb on - strand, within Dsui_2620 at 2772.875 kb on + strand, within Dsui_2620 at 2772.883 kb on - strand, within Dsui_2620 at 2772.940 kb on - strand, within Dsui_2620 at 2772.969 kb on - strand, within Dsui_2620 at 2773.071 kb on + strand, within Dsui_2620 at 2773.127 kb on + strand, within Dsui_2620 at 2773.159 kb on + strand, within Dsui_2620 at 2773.205 kb on - strand, within Dsui_2620 at 2773.259 kb on - strand, within Dsui_2620 at 2773.335 kb on + strand, within Dsui_2620 at 2773.410 kb on + strand, within Dsui_2620 at 2773.468 kb on + strand at 2773.499 kb on - strand at 2773.512 kb on - strand at 2773.561 kb on - strand at 2773.565 kb on - strand at 2773.565 kb on - strand at 2773.566 kb on - strand at 2773.592 kb on - strand at 2773.592 kb on - strand at 2773.619 kb on + strand at 2773.622 kb on - strand at 2773.645 kb on + strand at 2773.653 kb on - strand at 2773.694 kb on + strand at 2773.694 kb on + strand at 2773.694 kb on + strand at 2773.719 kb on - strand at 2773.763 kb on + strand at 2773.793 kb on - strand at 2773.842 kb on - strand, within Dsui_2621 at 2773.854 kb on + strand, within Dsui_2621 at 2773.989 kb on - strand, within Dsui_2621 at 2773.991 kb on + strand, within Dsui_2621 at 2774.012 kb on + strand, within Dsui_2621 at 2774.056 kb on + strand, within Dsui_2621 at 2774.081 kb on + strand, within Dsui_2621 at 2774.088 kb on + strand, within Dsui_2621 at 2774.089 kb on - strand, within Dsui_2621 at 2774.140 kb on - strand, within Dsui_2621 at 2774.145 kb on + strand, within Dsui_2621 at 2774.261 kb on - strand, within Dsui_2621 at 2774.346 kb on + strand, within Dsui_2621 at 2774.364 kb on - strand, within Dsui_2621 at 2774.380 kb on + strand, within Dsui_2621 at 2774.423 kb on + strand, within Dsui_2621 at 2774.426 kb on - strand, within Dsui_2621 at 2774.445 kb on - strand, within Dsui_2621 at 2774.500 kb on - strand, within Dsui_2621 at 2774.523 kb on - strand, within Dsui_2621 at 2774.524 kb on - strand, within Dsui_2621 at 2774.545 kb on + strand, within Dsui_2621 at 2774.545 kb on + strand, within Dsui_2621 at 2774.555 kb on - strand, within Dsui_2621 at 2774.555 kb on - strand, within Dsui_2621 at 2774.558 kb on - strand, within Dsui_2621 at 2774.561 kb on - strand, within Dsui_2621 at 2774.618 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,771,592 + Dsui_2619 0.63 +0.7 2,771,730 + +0.7 2,771,730 + +0.7 2,771,735 + +0.7 2,771,790 - +0.7 2,771,803 + -0.9 2,771,906 - Dsui_2620 0.12 -0.3 2,772,105 - Dsui_2620 0.22 +0.7 2,772,213 + Dsui_2620 0.27 -0.9 2,772,251 + Dsui_2620 0.29 +0.7 2,772,341 + Dsui_2620 0.34 +0.7 2,772,450 - Dsui_2620 0.40 +0.7 2,772,456 - Dsui_2620 0.40 +0.2 2,772,467 - Dsui_2620 0.40 -0.9 2,772,542 + Dsui_2620 0.44 -1.3 2,772,610 - Dsui_2620 0.48 -1.3 2,772,616 + +0.7 2,772,636 + Dsui_2620 0.49 -1.6 2,772,644 - Dsui_2620 0.50 -0.9 2,772,659 + Dsui_2620 0.50 +0.7 2,772,659 + Dsui_2620 0.50 +0.7 2,772,816 + Dsui_2620 0.58 +0.7 2,772,819 + Dsui_2620 0.59 +0.7 2,772,824 - Dsui_2620 0.59 -0.3 2,772,875 + Dsui_2620 0.62 -1.3 2,772,883 - Dsui_2620 0.62 +0.7 2,772,940 - Dsui_2620 0.65 -0.1 2,772,969 - Dsui_2620 0.66 -0.3 2,773,071 + Dsui_2620 0.72 -1.3 2,773,127 + Dsui_2620 0.74 -0.3 2,773,159 + Dsui_2620 0.76 -0.3 2,773,205 - Dsui_2620 0.79 +0.7 2,773,259 - Dsui_2620 0.81 -0.3 2,773,335 + Dsui_2620 0.85 +0.7 2,773,410 + Dsui_2620 0.89 -0.3 2,773,468 + +0.7 2,773,499 - +0.5 2,773,512 - -1.6 2,773,561 - +0.7 2,773,565 - +0.7 2,773,565 - -0.7 2,773,566 - +0.7 2,773,592 - -0.3 2,773,592 - +0.7 2,773,619 + -0.9 2,773,622 - +0.7 2,773,645 + -0.3 2,773,653 - -0.9 2,773,694 + -0.3 2,773,694 + -0.3 2,773,694 + -0.3 2,773,719 - +0.4 2,773,763 + -0.3 2,773,793 - +0.7 2,773,842 - Dsui_2621 0.10 +0.7 2,773,854 + Dsui_2621 0.11 +0.7 2,773,989 - Dsui_2621 0.26 -0.9 2,773,991 + Dsui_2621 0.27 +0.7 2,774,012 + Dsui_2621 0.29 +0.7 2,774,056 + Dsui_2621 0.34 +0.7 2,774,081 + Dsui_2621 0.36 -0.3 2,774,088 + Dsui_2621 0.37 +0.7 2,774,089 - Dsui_2621 0.37 -0.0 2,774,140 - Dsui_2621 0.43 +0.7 2,774,145 + Dsui_2621 0.43 -1.6 2,774,261 - Dsui_2621 0.56 +2.3 2,774,346 + Dsui_2621 0.66 +0.7 2,774,364 - Dsui_2621 0.68 +0.7 2,774,380 + Dsui_2621 0.69 -0.3 2,774,423 + Dsui_2621 0.74 +0.7 2,774,426 - Dsui_2621 0.74 +0.7 2,774,445 - Dsui_2621 0.76 -2.1 2,774,500 - Dsui_2621 0.83 -0.0 2,774,523 - Dsui_2621 0.85 -0.3 2,774,524 - Dsui_2621 0.85 -1.3 2,774,545 + Dsui_2621 0.87 -0.3 2,774,545 + Dsui_2621 0.87 -0.3 2,774,555 - Dsui_2621 0.89 -0.3 2,774,555 - Dsui_2621 0.89 -1.3 2,774,558 - Dsui_2621 0.89 +0.7 2,774,561 - Dsui_2621 0.89 +1.1 2,774,618 + -0.3
Or see this region's nucleotide sequence