Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2510 and Dsui_2511 are separated by 10 nucleotides Dsui_2511 and Dsui_2512 overlap by 17 nucleotides
Dsui_2510: Dsui_2510 - anaerobic dehydrogenase, typically selenocysteine-containing, at 2,657,235 to 2,660,321
_2510
Dsui_2511: Dsui_2511 - response regulator, at 2,660,332 to 2,660,964
_2511
Dsui_2512: Dsui_2512 - histidine kinase, at 2,660,948 to 2,662,669
_2512
Position (kb)
2660
2661 Strain fitness (log2 ratio)
-2
-1
0
1 at 2659.385 kb on + strand, within Dsui_2510 at 2659.418 kb on + strand, within Dsui_2510 at 2659.418 kb on + strand, within Dsui_2510 at 2659.426 kb on - strand, within Dsui_2510 at 2659.441 kb on + strand, within Dsui_2510 at 2659.481 kb on - strand, within Dsui_2510 at 2659.481 kb on - strand, within Dsui_2510 at 2659.497 kb on + strand, within Dsui_2510 at 2659.567 kb on + strand, within Dsui_2510 at 2659.609 kb on - strand, within Dsui_2510 at 2659.630 kb on + strand, within Dsui_2510 at 2659.802 kb on + strand, within Dsui_2510 at 2659.825 kb on + strand, within Dsui_2510 at 2659.843 kb on - strand, within Dsui_2510 at 2659.903 kb on + strand, within Dsui_2510 at 2659.961 kb on + strand, within Dsui_2510 at 2660.047 kb on - strand at 2660.086 kb on + strand at 2660.169 kb on + strand at 2660.183 kb on - strand at 2660.200 kb on + strand at 2660.233 kb on - strand at 2660.243 kb on + strand at 2660.335 kb on + strand at 2660.343 kb on - strand at 2660.343 kb on - strand at 2660.343 kb on - strand at 2660.457 kb on - strand, within Dsui_2511 at 2660.477 kb on + strand, within Dsui_2511 at 2660.490 kb on - strand, within Dsui_2511 at 2660.585 kb on + strand, within Dsui_2511 at 2660.715 kb on + strand, within Dsui_2511 at 2660.730 kb on + strand, within Dsui_2511 at 2660.749 kb on - strand, within Dsui_2511 at 2660.765 kb on - strand, within Dsui_2511 at 2660.770 kb on + strand, within Dsui_2511 at 2660.860 kb on - strand, within Dsui_2511 at 2660.924 kb on + strand at 2660.952 kb on - strand at 2660.981 kb on + strand at 2661.062 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.075 kb on - strand at 2661.148 kb on - strand, within Dsui_2512 at 2661.293 kb on + strand, within Dsui_2512 at 2661.301 kb on - strand, within Dsui_2512 at 2661.390 kb on + strand, within Dsui_2512 at 2661.400 kb on + strand, within Dsui_2512 at 2661.408 kb on - strand, within Dsui_2512 at 2661.579 kb on + strand, within Dsui_2512 at 2661.666 kb on - strand, within Dsui_2512 at 2661.718 kb on + strand, within Dsui_2512 at 2661.718 kb on + strand, within Dsui_2512 at 2661.718 kb on + strand at 2661.733 kb on + strand, within Dsui_2512 at 2661.802 kb on - strand, within Dsui_2512 at 2661.863 kb on - strand, within Dsui_2512 at 2661.886 kb on + strand, within Dsui_2512 at 2661.913 kb on + strand, within Dsui_2512 at 2661.918 kb on + strand, within Dsui_2512
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,659,385 + Dsui_2510 0.70 -0.3 2,659,418 + Dsui_2510 0.71 -1.8 2,659,418 + Dsui_2510 0.71 -0.3 2,659,426 - Dsui_2510 0.71 -0.3 2,659,441 + Dsui_2510 0.71 -0.3 2,659,481 - Dsui_2510 0.73 +0.7 2,659,481 - Dsui_2510 0.73 -0.3 2,659,497 + Dsui_2510 0.73 -1.6 2,659,567 + Dsui_2510 0.76 +0.7 2,659,609 - Dsui_2510 0.77 -0.3 2,659,630 + Dsui_2510 0.78 +0.7 2,659,802 + Dsui_2510 0.83 +0.7 2,659,825 + Dsui_2510 0.84 -0.8 2,659,843 - Dsui_2510 0.84 -0.3 2,659,903 + Dsui_2510 0.86 -0.8 2,659,961 + Dsui_2510 0.88 -0.8 2,660,047 - -0.8 2,660,086 + -0.8 2,660,169 + +0.7 2,660,183 - -0.8 2,660,200 + -0.3 2,660,233 - -0.3 2,660,243 + +0.7 2,660,335 + -1.3 2,660,343 - -0.5 2,660,343 - -0.4 2,660,343 - -0.6 2,660,457 - Dsui_2511 0.20 +0.1 2,660,477 + Dsui_2511 0.23 +0.7 2,660,490 - Dsui_2511 0.25 -0.3 2,660,585 + Dsui_2511 0.40 +0.7 2,660,715 + Dsui_2511 0.61 +0.7 2,660,730 + Dsui_2511 0.63 +0.7 2,660,749 - Dsui_2511 0.66 -0.6 2,660,765 - Dsui_2511 0.68 -0.6 2,660,770 + Dsui_2511 0.69 -0.8 2,660,860 - Dsui_2511 0.83 -1.5 2,660,924 + -2.3 2,660,952 - -0.7 2,660,981 + -0.3 2,661,062 + -0.3 2,661,073 + -0.3 2,661,073 + +0.7 2,661,073 + -0.8 2,661,073 + +0.7 2,661,075 - -2.7 2,661,148 - Dsui_2512 0.12 +0.7 2,661,293 + Dsui_2512 0.20 +0.7 2,661,301 - Dsui_2512 0.20 -0.8 2,661,390 + Dsui_2512 0.26 -0.3 2,661,400 + Dsui_2512 0.26 +0.7 2,661,408 - Dsui_2512 0.27 -0.3 2,661,579 + Dsui_2512 0.37 +0.7 2,661,666 - Dsui_2512 0.42 -0.8 2,661,718 + Dsui_2512 0.45 -0.3 2,661,718 + Dsui_2512 0.45 +0.7 2,661,718 + +0.7 2,661,733 + Dsui_2512 0.46 +0.7 2,661,802 - Dsui_2512 0.50 -0.3 2,661,863 - Dsui_2512 0.53 -0.3 2,661,886 + Dsui_2512 0.54 +1.7 2,661,913 + Dsui_2512 0.56 +0.7 2,661,918 + Dsui_2512 0.56 -0.3
Or see this region's nucleotide sequence