Strain Fitness in Dechlorosoma suillum PS around Dsui_2426

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2425 and Dsui_2426 are separated by 184 nucleotidesDsui_2426 and Dsui_2427 are separated by 15 nucleotides Dsui_2425: Dsui_2425 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,583,946 to 2,585,865 _2425 Dsui_2426: Dsui_2426 - hypothetical protein, at 2,586,050 to 2,586,832 _2426 Dsui_2427: Dsui_2427 - molybdenum cofactor biosynthesis protein A, at 2,586,848 to 2,587,921 _2427 Position (kb) 2586 2587Strain fitness (log2 ratio) -2 -1 0 1at 2585.058 kb on + strandat 2585.096 kb on - strand, within Dsui_2425at 2585.176 kb on + strandat 2585.184 kb on - strand, within Dsui_2425at 2585.221 kb on - strand, within Dsui_2425at 2585.226 kb on - strand, within Dsui_2425at 2585.274 kb on - strand, within Dsui_2425at 2585.378 kb on + strand, within Dsui_2425at 2585.423 kb on + strand, within Dsui_2425at 2585.423 kb on + strand, within Dsui_2425at 2585.423 kb on + strandat 2585.431 kb on - strand, within Dsui_2425at 2585.431 kb on - strand, within Dsui_2425at 2585.476 kb on + strand, within Dsui_2425at 2585.476 kb on + strand, within Dsui_2425at 2585.532 kb on - strand, within Dsui_2425at 2585.574 kb on - strand, within Dsui_2425at 2585.582 kb on - strand, within Dsui_2425at 2585.638 kb on + strandat 2585.696 kb on - strandat 2585.718 kb on + strandat 2585.721 kb on - strandat 2585.747 kb on - strandat 2585.817 kb on - strandat 2585.877 kb on + strandat 2585.877 kb on + strandat 2585.885 kb on - strandat 2585.885 kb on - strandat 2585.897 kb on - strandat 2585.968 kb on - strandat 2585.983 kb on + strandat 2586.032 kb on + strandat 2586.098 kb on - strandat 2586.127 kb on + strandat 2586.231 kb on + strand, within Dsui_2426at 2586.277 kb on + strand, within Dsui_2426at 2586.279 kb on - strand, within Dsui_2426at 2586.280 kb on - strand, within Dsui_2426at 2586.301 kb on - strand, within Dsui_2426at 2586.321 kb on + strand, within Dsui_2426at 2586.329 kb on - strand, within Dsui_2426at 2586.361 kb on + strand, within Dsui_2426at 2586.369 kb on + strandat 2586.369 kb on + strandat 2586.377 kb on - strand, within Dsui_2426at 2586.396 kb on + strand, within Dsui_2426at 2586.510 kb on - strand, within Dsui_2426at 2586.544 kb on - strandat 2586.602 kb on - strand, within Dsui_2426at 2586.629 kb on + strandat 2586.629 kb on + strand, within Dsui_2426at 2586.951 kb on - strandat 2587.016 kb on - strand, within Dsui_2427at 2587.021 kb on - strand, within Dsui_2427at 2587.047 kb on + strand, within Dsui_2427at 2587.068 kb on - strand, within Dsui_2427at 2587.292 kb on + strand, within Dsui_2427at 2587.294 kb on - strand, within Dsui_2427at 2587.317 kb on + strand, within Dsui_2427at 2587.367 kb on - strand, within Dsui_2427at 2587.500 kb on - strand, within Dsui_2427at 2587.511 kb on - strand, within Dsui_2427at 2587.555 kb on + strand, within Dsui_2427at 2587.600 kb on + strandat 2587.608 kb on - strand, within Dsui_2427at 2587.652 kb on + strand, within Dsui_2427at 2587.656 kb on - strand, within Dsui_2427at 2587.696 kb on + strand, within Dsui_2427at 2587.704 kb on - strand, within Dsui_2427at 2587.704 kb on - strand, within Dsui_2427at 2587.704 kb on - strand, within Dsui_2427at 2587.739 kb on - strand, within Dsui_2427at 2587.787 kb on - strand, within Dsui_2427

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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2,585,058 + +0.8
2,585,096 - Dsui_2425 0.60 -1.2
2,585,176 + -0.2
2,585,184 - Dsui_2425 0.64 +0.8
2,585,221 - Dsui_2425 0.66 -0.4
2,585,226 - Dsui_2425 0.67 -0.6
2,585,274 - Dsui_2425 0.69 -1.2
2,585,378 + Dsui_2425 0.75 -1.0
2,585,423 + Dsui_2425 0.77 +0.8
2,585,423 + Dsui_2425 0.77 +0.8
2,585,423 + +0.8
2,585,431 - Dsui_2425 0.77 +1.5
2,585,431 - Dsui_2425 0.77 +0.0
2,585,476 + Dsui_2425 0.80 -0.2
2,585,476 + Dsui_2425 0.80 -0.8
2,585,532 - Dsui_2425 0.83 -0.8
2,585,574 - Dsui_2425 0.85 -0.6
2,585,582 - Dsui_2425 0.85 -1.2
2,585,638 + +0.8
2,585,696 - -1.2
2,585,718 + +0.8
2,585,721 - +0.8
2,585,747 - -0.5
2,585,817 - -0.7
2,585,877 + +0.8
2,585,877 + -0.8
2,585,885 - -0.8
2,585,885 - -1.6
2,585,897 - -0.2
2,585,968 - +0.8
2,585,983 + +0.8
2,586,032 + -0.2
2,586,098 - -2.0
2,586,127 + -1.2
2,586,231 + Dsui_2426 0.23 +0.8
2,586,277 + Dsui_2426 0.29 -2.6
2,586,279 - Dsui_2426 0.29 -0.2
2,586,280 - Dsui_2426 0.29 -2.0
2,586,301 - Dsui_2426 0.32 +0.8
2,586,321 + Dsui_2426 0.35 -0.8
2,586,329 - Dsui_2426 0.36 +0.8
2,586,361 + Dsui_2426 0.40 +0.8
2,586,369 + +0.8
2,586,369 + +0.8
2,586,377 - Dsui_2426 0.42 +0.8
2,586,396 + Dsui_2426 0.44 -2.0
2,586,510 - Dsui_2426 0.59 -1.8
2,586,544 - +0.8
2,586,602 - Dsui_2426 0.70 -0.2
2,586,629 + -0.8
2,586,629 + Dsui_2426 0.74 +0.8
2,586,951 - -2.7
2,587,016 - Dsui_2427 0.16 -1.8
2,587,021 - Dsui_2427 0.16 -0.4
2,587,047 + Dsui_2427 0.19 -1.8
2,587,068 - Dsui_2427 0.20 -1.5
2,587,292 + Dsui_2427 0.41 -0.8
2,587,294 - Dsui_2427 0.42 -0.9
2,587,317 + Dsui_2427 0.44 -0.2
2,587,367 - Dsui_2427 0.48 -1.0
2,587,500 - Dsui_2427 0.61 +0.2
2,587,511 - Dsui_2427 0.62 -1.5
2,587,555 + Dsui_2427 0.66 -1.2
2,587,600 + +0.8
2,587,608 - Dsui_2427 0.71 -1.6
2,587,652 + Dsui_2427 0.75 -1.2
2,587,656 - Dsui_2427 0.75 -0.5
2,587,696 + Dsui_2427 0.79 -0.2
2,587,704 - Dsui_2427 0.80 -1.0
2,587,704 - Dsui_2427 0.80 -1.6
2,587,704 - Dsui_2427 0.80 -1.4
2,587,739 - Dsui_2427 0.83 -0.6
2,587,787 - Dsui_2427 0.87 +0.4

Or see this region's nucleotide sequence