Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2381 and Dsui_2382 are separated by 137 nucleotides Dsui_2382 and Dsui_2383 are separated by 87 nucleotides
Dsui_2381: Dsui_2381 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 2,528,965 to 2,530,041
_2381
Dsui_2382: Dsui_2382 - PAS domain S-box, at 2,530,179 to 2,532,755
_2382
Dsui_2383: Dsui_2383 - hypothetical protein, at 2,532,843 to 2,534,117
_2383
Position (kb)
2530
2531
2532
2533 Strain fitness (log2 ratio)
-2
-1
0
1 at 2530.155 kb on + strand at 2530.155 kb on + strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.198 kb on + strand at 2530.289 kb on - strand at 2530.471 kb on - strand, within Dsui_2382 at 2530.471 kb on - strand, within Dsui_2382 at 2530.613 kb on + strand at 2530.837 kb on - strand, within Dsui_2382 at 2530.846 kb on - strand, within Dsui_2382 at 2530.934 kb on + strand at 2530.942 kb on - strand at 2531.223 kb on - strand, within Dsui_2382 at 2531.335 kb on - strand, within Dsui_2382 at 2531.356 kb on - strand at 2531.415 kb on + strand at 2531.484 kb on - strand, within Dsui_2382 at 2531.489 kb on - strand at 2531.563 kb on - strand, within Dsui_2382 at 2531.579 kb on - strand, within Dsui_2382 at 2531.579 kb on - strand, within Dsui_2382 at 2531.584 kb on - strand at 2531.779 kb on - strand, within Dsui_2382 at 2531.822 kb on + strand, within Dsui_2382 at 2532.037 kb on - strand, within Dsui_2382 at 2532.083 kb on - strand, within Dsui_2382 at 2532.477 kb on - strand, within Dsui_2382 at 2532.594 kb on - strand at 2532.744 kb on - strand at 2533.261 kb on - strand at 2533.326 kb on + strand, within Dsui_2383 at 2533.331 kb on + strand, within Dsui_2383 at 2533.352 kb on + strand, within Dsui_2383 at 2533.353 kb on + strand, within Dsui_2383 at 2533.372 kb on + strand at 2533.488 kb on + strand, within Dsui_2383 at 2533.488 kb on + strand at 2533.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,530,155 + -1.5 2,530,155 + -0.2 2,530,163 - +0.8 2,530,163 - +0.8 2,530,163 - -0.2 2,530,163 - +0.8 2,530,163 - +0.8 2,530,163 - +0.8 2,530,198 + +0.8 2,530,289 - +0.8 2,530,471 - Dsui_2382 0.11 +0.8 2,530,471 - Dsui_2382 0.11 +0.8 2,530,613 + -0.2 2,530,837 - Dsui_2382 0.26 -1.2 2,530,846 - Dsui_2382 0.26 -0.2 2,530,934 + +0.8 2,530,942 - +0.8 2,531,223 - Dsui_2382 0.41 -1.2 2,531,335 - Dsui_2382 0.45 +0.8 2,531,356 - +0.8 2,531,415 + +0.8 2,531,484 - Dsui_2382 0.51 +0.8 2,531,489 - -0.8 2,531,563 - Dsui_2382 0.54 -1.2 2,531,579 - Dsui_2382 0.54 -0.8 2,531,579 - Dsui_2382 0.54 -0.8 2,531,584 - +0.8 2,531,779 - Dsui_2382 0.62 +0.8 2,531,822 + Dsui_2382 0.64 +0.8 2,532,037 - Dsui_2382 0.72 -2.2 2,532,083 - Dsui_2382 0.74 -0.2 2,532,477 - Dsui_2382 0.89 -0.2 2,532,594 - +0.8 2,532,744 - -0.2 2,533,261 - -0.8 2,533,326 + Dsui_2383 0.38 +0.8 2,533,331 + Dsui_2383 0.38 +0.8 2,533,352 + Dsui_2383 0.40 +0.8 2,533,353 + Dsui_2383 0.40 +0.8 2,533,372 + -0.8 2,533,488 + Dsui_2383 0.51 -0.2 2,533,488 + -0.2 2,533,706 - -0.2
Or see this region's nucleotide sequence