Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2330 and Dsui_2331 are separated by 97 nucleotides Dsui_2331 and Dsui_2332 are separated by 38 nucleotides
Dsui_2330: Dsui_2330 - 3-hydroxyacyl-CoA dehydrogenase, at 2,483,546 to 2,484,394
_2330
Dsui_2331: Dsui_2331 - heat shock protein, at 2,484,492 to 2,485,643
_2331
Dsui_2332: Dsui_2332 - uracil-xanthine permease, at 2,485,682 to 2,486,923
_2332
Position (kb)
2484
2485
2486 Strain fitness (log2 ratio)
-2
-1
0
1 at 2483.559 kb on - strand at 2483.630 kb on - strand at 2483.641 kb on - strand at 2483.691 kb on + strand, within Dsui_2330 at 2483.755 kb on + strand, within Dsui_2330 at 2483.780 kb on + strand, within Dsui_2330 at 2483.788 kb on - strand at 2483.788 kb on - strand, within Dsui_2330 at 2483.986 kb on - strand at 2484.055 kb on + strand at 2484.129 kb on - strand, within Dsui_2330 at 2484.228 kb on + strand, within Dsui_2330 at 2484.376 kb on + strand at 2484.387 kb on - strand at 2484.591 kb on + strand at 2484.599 kb on - strand at 2484.599 kb on - strand at 2484.996 kb on - strand, within Dsui_2331 at 2485.093 kb on + strand at 2485.167 kb on - strand, within Dsui_2331 at 2485.209 kb on + strand, within Dsui_2331 at 2485.243 kb on - strand, within Dsui_2331 at 2485.402 kb on - strand, within Dsui_2331 at 2485.425 kb on - strand, within Dsui_2331 at 2485.728 kb on - strand at 2485.764 kb on - strand at 2485.827 kb on - strand, within Dsui_2332 at 2485.853 kb on + strand, within Dsui_2332 at 2485.883 kb on + strand, within Dsui_2332 at 2485.891 kb on - strand, within Dsui_2332 at 2485.965 kb on - strand, within Dsui_2332 at 2486.116 kb on + strand, within Dsui_2332 at 2486.124 kb on - strand, within Dsui_2332 at 2486.127 kb on + strand at 2486.149 kb on + strand, within Dsui_2332 at 2486.162 kb on + strand at 2486.170 kb on - strand, within Dsui_2332 at 2486.170 kb on - strand, within Dsui_2332 at 2486.171 kb on - strand, within Dsui_2332 at 2486.218 kb on + strand at 2486.368 kb on - strand, within Dsui_2332 at 2486.533 kb on + strand at 2486.533 kb on + strand, within Dsui_2332 at 2486.536 kb on - strand, within Dsui_2332 at 2486.537 kb on - strand, within Dsui_2332 at 2486.541 kb on - strand, within Dsui_2332 at 2486.541 kb on - strand, within Dsui_2332 at 2486.554 kb on - strand, within Dsui_2332
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,483,559 - +0.8 2,483,630 - +0.8 2,483,641 - +0.8 2,483,691 + Dsui_2330 0.17 +0.8 2,483,755 + Dsui_2330 0.25 -1.5 2,483,780 + Dsui_2330 0.28 -1.5 2,483,788 - +0.8 2,483,788 - Dsui_2330 0.29 -1.2 2,483,986 - +0.8 2,484,055 + -0.2 2,484,129 - Dsui_2330 0.69 -1.8 2,484,228 + Dsui_2330 0.80 -1.5 2,484,376 + +0.5 2,484,387 - +0.8 2,484,591 + -1.8 2,484,599 - -1.8 2,484,599 - +0.1 2,484,996 - Dsui_2331 0.44 +0.3 2,485,093 + -1.2 2,485,167 - Dsui_2331 0.59 +0.3 2,485,209 + Dsui_2331 0.62 +0.8 2,485,243 - Dsui_2331 0.65 +0.5 2,485,402 - Dsui_2331 0.79 -0.7 2,485,425 - Dsui_2331 0.81 +1.4 2,485,728 - -0.5 2,485,764 - +0.2 2,485,827 - Dsui_2332 0.12 -1.5 2,485,853 + Dsui_2332 0.14 -1.2 2,485,883 + Dsui_2332 0.16 -0.5 2,485,891 - Dsui_2332 0.17 -0.3 2,485,965 - Dsui_2332 0.23 -0.3 2,486,116 + Dsui_2332 0.35 -0.2 2,486,124 - Dsui_2332 0.36 -2.4 2,486,127 + -0.2 2,486,149 + Dsui_2332 0.38 -1.2 2,486,162 + +0.8 2,486,170 - Dsui_2332 0.39 +0.8 2,486,170 - Dsui_2332 0.39 +0.1 2,486,171 - Dsui_2332 0.39 +0.4 2,486,218 + +0.8 2,486,368 - Dsui_2332 0.55 -0.2 2,486,533 + -0.2 2,486,533 + Dsui_2332 0.69 -2.4 2,486,536 - Dsui_2332 0.69 +0.5 2,486,537 - Dsui_2332 0.69 -0.4 2,486,541 - Dsui_2332 0.69 +1.2 2,486,541 - Dsui_2332 0.69 -0.0 2,486,554 - Dsui_2332 0.70 -1.4
Or see this region's nucleotide sequence