Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2153 and Dsui_2154 are separated by 27 nucleotides Dsui_2154 and Dsui_2155 are separated by 269 nucleotides Dsui_2155 and Dsui_2156 are separated by 202 nucleotides
Dsui_2153: Dsui_2153 - molybdopterin converting factor, subunit 1, at 2,283,922 to 2,284,173
_2153
Dsui_2154: Dsui_2154 - molybdopterin converting factor, large subunit, at 2,284,201 to 2,284,662
_2154
Dsui_2155: Dsui_2155 - hypothetical protein, at 2,284,932 to 2,285,822
_2155
Dsui_2156: Dsui_2156 - methyl-accepting chemotaxis protein, at 2,286,025 to 2,287,665
_2156
Position (kb)
2284
2285
2286 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2283.966 kb on - strand, within Dsui_2153 at 2283.991 kb on + strand, within Dsui_2153 at 2284.104 kb on + strand, within Dsui_2153 at 2284.454 kb on - strand, within Dsui_2154 at 2284.462 kb on - strand, within Dsui_2154 at 2284.491 kb on + strand, within Dsui_2154 at 2284.793 kb on + strand at 2284.988 kb on + strand at 2285.062 kb on + strand, within Dsui_2155 at 2285.078 kb on - strand, within Dsui_2155 at 2285.107 kb on + strand at 2285.107 kb on + strand, within Dsui_2155 at 2285.161 kb on - strand, within Dsui_2155 at 2285.307 kb on - strand at 2285.358 kb on + strand, within Dsui_2155 at 2285.366 kb on - strand at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.563 kb on + strand, within Dsui_2155 at 2285.621 kb on + strand, within Dsui_2155 at 2285.726 kb on + strand, within Dsui_2155 at 2285.763 kb on - strand at 2285.833 kb on + strand at 2285.962 kb on + strand at 2285.962 kb on + strand at 2285.962 kb on + strand at 2285.962 kb on + strand at 2285.962 kb on + strand at 2285.970 kb on - strand at 2285.970 kb on - strand at 2286.067 kb on + strand at 2286.132 kb on - strand at 2286.315 kb on + strand, within Dsui_2156 at 2286.315 kb on + strand, within Dsui_2156 at 2286.323 kb on - strand, within Dsui_2156 at 2286.356 kb on - strand, within Dsui_2156 at 2286.546 kb on + strand, within Dsui_2156 at 2286.559 kb on + strand, within Dsui_2156 at 2286.586 kb on + strand, within Dsui_2156 at 2286.594 kb on - strand, within Dsui_2156 at 2286.594 kb on - strand, within Dsui_2156 at 2286.634 kb on - strand, within Dsui_2156 at 2286.639 kb on - strand, within Dsui_2156 at 2286.659 kb on - strand, within Dsui_2156
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,283,966 - Dsui_2153 0.17 -2.9 2,283,991 + Dsui_2153 0.27 -0.8 2,284,104 + Dsui_2153 0.72 -0.0 2,284,454 - Dsui_2154 0.55 +0.0 2,284,462 - Dsui_2154 0.56 -1.0 2,284,491 + Dsui_2154 0.63 +0.1 2,284,793 + +0.5 2,284,988 + +0.0 2,285,062 + Dsui_2155 0.15 +0.0 2,285,078 - Dsui_2155 0.16 +1.0 2,285,107 + +2.0 2,285,107 + Dsui_2155 0.20 -2.2 2,285,161 - Dsui_2155 0.26 -0.6 2,285,307 - +1.0 2,285,358 + Dsui_2155 0.48 -2.0 2,285,366 - +1.0 2,285,502 - Dsui_2155 0.64 +0.0 2,285,502 - Dsui_2155 0.64 +0.0 2,285,502 - Dsui_2155 0.64 +0.0 2,285,502 - Dsui_2155 0.64 +1.0 2,285,502 - Dsui_2155 0.64 +1.0 2,285,563 + Dsui_2155 0.71 +1.0 2,285,621 + Dsui_2155 0.77 -1.1 2,285,726 + Dsui_2155 0.89 +0.4 2,285,763 - -0.6 2,285,833 + +0.0 2,285,962 + +0.0 2,285,962 + -1.0 2,285,962 + +0.0 2,285,962 + +1.0 2,285,962 + +1.0 2,285,970 - +0.0 2,285,970 - +0.0 2,286,067 + -1.3 2,286,132 - +0.0 2,286,315 + Dsui_2156 0.18 +0.0 2,286,315 + Dsui_2156 0.18 +0.0 2,286,323 - Dsui_2156 0.18 +0.2 2,286,356 - Dsui_2156 0.20 -0.1 2,286,546 + Dsui_2156 0.32 -0.6 2,286,559 + Dsui_2156 0.33 +1.0 2,286,586 + Dsui_2156 0.34 +1.0 2,286,594 - Dsui_2156 0.35 -0.9 2,286,594 - Dsui_2156 0.35 -0.2 2,286,634 - Dsui_2156 0.37 +0.3 2,286,639 - Dsui_2156 0.37 +0.1 2,286,659 - Dsui_2156 0.39 +0.1
Or see this region's nucleotide sequence