Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1980 and Dsui_1981 are separated by 123 nucleotides Dsui_1981 and Dsui_1982 are separated by 170 nucleotides
Dsui_1980: Dsui_1980 - hypothetical protein, at 2,089,275 to 2,089,748
_1980
Dsui_1981: Dsui_1981 - 23S rRNA (uracil-5-)-methyltransferase RumA, at 2,089,872 to 2,091,167
_1981
Dsui_1982: Dsui_1982 - sulfate adenylyltransferase, large subunit, at 2,091,338 to 2,092,612
_1982
Position (kb)
2089
2090
2091
2092 Strain fitness (log2 ratio)
-2
-1
0
1 at 2089.161 kb on - strand at 2089.179 kb on + strand at 2089.234 kb on - strand at 2089.234 kb on - strand at 2089.289 kb on + strand at 2089.311 kb on - strand at 2089.350 kb on - strand, within Dsui_1980 at 2089.350 kb on - strand, within Dsui_1980 at 2089.410 kb on + strand, within Dsui_1980 at 2089.471 kb on - strand, within Dsui_1980 at 2089.482 kb on - strand, within Dsui_1980 at 2089.549 kb on - strand at 2089.569 kb on + strand at 2089.570 kb on - strand, within Dsui_1980 at 2089.610 kb on + strand, within Dsui_1980 at 2089.627 kb on - strand, within Dsui_1980 at 2089.639 kb on + strand, within Dsui_1980 at 2089.662 kb on - strand, within Dsui_1980 at 2089.674 kb on - strand, within Dsui_1980 at 2089.698 kb on + strand, within Dsui_1980 at 2089.752 kb on - strand at 2089.763 kb on - strand at 2089.773 kb on - strand at 2089.784 kb on + strand at 2089.875 kb on - strand at 2089.876 kb on - strand at 2089.876 kb on - strand at 2089.923 kb on + strand at 2089.939 kb on - strand at 2089.966 kb on + strand at 2090.011 kb on + strand, within Dsui_1981 at 2090.024 kb on - strand, within Dsui_1981 at 2090.026 kb on + strand, within Dsui_1981 at 2090.029 kb on - strand at 2090.029 kb on - strand at 2090.029 kb on - strand, within Dsui_1981 at 2090.039 kb on - strand, within Dsui_1981 at 2090.124 kb on - strand, within Dsui_1981 at 2090.185 kb on - strand, within Dsui_1981 at 2090.193 kb on + strand, within Dsui_1981 at 2090.201 kb on + strand, within Dsui_1981 at 2090.207 kb on + strand, within Dsui_1981 at 2090.225 kb on - strand, within Dsui_1981 at 2090.446 kb on + strand, within Dsui_1981 at 2090.472 kb on - strand, within Dsui_1981 at 2090.543 kb on + strand, within Dsui_1981 at 2090.543 kb on + strand, within Dsui_1981 at 2090.551 kb on - strand, within Dsui_1981 at 2090.564 kb on - strand, within Dsui_1981 at 2090.564 kb on - strand, within Dsui_1981 at 2090.587 kb on + strand, within Dsui_1981 at 2090.587 kb on + strand, within Dsui_1981 at 2090.587 kb on + strand, within Dsui_1981 at 2090.595 kb on - strand, within Dsui_1981 at 2090.595 kb on - strand, within Dsui_1981 at 2090.595 kb on - strand, within Dsui_1981 at 2090.596 kb on + strand, within Dsui_1981 at 2090.597 kb on + strand, within Dsui_1981 at 2090.706 kb on - strand, within Dsui_1981 at 2090.739 kb on - strand, within Dsui_1981 at 2090.758 kb on + strand, within Dsui_1981 at 2090.822 kb on + strand, within Dsui_1981 at 2090.900 kb on - strand, within Dsui_1981 at 2090.989 kb on - strand at 2091.002 kb on - strand, within Dsui_1981 at 2091.007 kb on - strand, within Dsui_1981 at 2091.058 kb on + strand at 2091.061 kb on - strand at 2091.066 kb on - strand at 2091.119 kb on + strand at 2091.135 kb on - strand at 2091.142 kb on + strand at 2091.150 kb on - strand at 2091.228 kb on + strand at 2091.241 kb on + strand at 2091.339 kb on - strand at 2091.347 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 2,089,161 - -0.7 2,089,179 + +1.2 2,089,234 - -0.8 2,089,234 - +0.2 2,089,289 + -0.4 2,089,311 - +0.6 2,089,350 - Dsui_1980 0.16 +1.2 2,089,350 - Dsui_1980 0.16 -0.8 2,089,410 + Dsui_1980 0.28 +1.2 2,089,471 - Dsui_1980 0.41 +1.2 2,089,482 - Dsui_1980 0.44 -0.4 2,089,549 - +1.2 2,089,569 + +1.2 2,089,570 - Dsui_1980 0.62 +1.2 2,089,610 + Dsui_1980 0.71 +0.2 2,089,627 - Dsui_1980 0.74 -0.4 2,089,639 + Dsui_1980 0.77 -0.8 2,089,662 - Dsui_1980 0.82 +1.2 2,089,674 - Dsui_1980 0.84 +0.2 2,089,698 + Dsui_1980 0.89 -2.1 2,089,752 - +0.2 2,089,763 - +1.2 2,089,773 - +0.2 2,089,784 + +1.2 2,089,875 - +1.2 2,089,876 - -0.4 2,089,876 - -0.4 2,089,923 + +0.4 2,089,939 - +1.2 2,089,966 + -0.8 2,090,011 + Dsui_1981 0.11 +0.3 2,090,024 - Dsui_1981 0.12 +1.2 2,090,026 + Dsui_1981 0.12 -0.2 2,090,029 - +1.2 2,090,029 - +0.2 2,090,029 - Dsui_1981 0.12 +0.2 2,090,039 - Dsui_1981 0.13 +1.2 2,090,124 - Dsui_1981 0.19 +1.2 2,090,185 - Dsui_1981 0.24 -0.4 2,090,193 + Dsui_1981 0.25 -0.1 2,090,201 + Dsui_1981 0.25 +0.2 2,090,207 + Dsui_1981 0.26 +0.1 2,090,225 - Dsui_1981 0.27 +1.2 2,090,446 + Dsui_1981 0.44 -0.4 2,090,472 - Dsui_1981 0.46 +1.2 2,090,543 + Dsui_1981 0.52 -0.7 2,090,543 + Dsui_1981 0.52 -0.9 2,090,551 - Dsui_1981 0.52 -1.2 2,090,564 - Dsui_1981 0.53 +0.2 2,090,564 - Dsui_1981 0.53 -0.4 2,090,587 + Dsui_1981 0.55 +0.5 2,090,587 + Dsui_1981 0.55 +0.3 2,090,587 + Dsui_1981 0.55 -0.2 2,090,595 - Dsui_1981 0.56 +1.2 2,090,595 - Dsui_1981 0.56 +0.2 2,090,595 - Dsui_1981 0.56 +1.2 2,090,596 + Dsui_1981 0.56 +0.6 2,090,597 + Dsui_1981 0.56 +0.3 2,090,706 - Dsui_1981 0.64 +0.2 2,090,739 - Dsui_1981 0.67 +1.2 2,090,758 + Dsui_1981 0.68 +0.9 2,090,822 + Dsui_1981 0.73 +0.5 2,090,900 - Dsui_1981 0.79 +0.2 2,090,989 - +1.2 2,091,002 - Dsui_1981 0.87 -0.4 2,091,007 - Dsui_1981 0.88 +1.2 2,091,058 + +1.4 2,091,061 - -1.4 2,091,066 - -1.2 2,091,119 + +0.3 2,091,135 - -0.4 2,091,142 + +0.4 2,091,150 - +0.2 2,091,228 + +1.2 2,091,241 + +1.2 2,091,339 - +0.6 2,091,347 - +0.4
Or see this region's nucleotide sequence