Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1749 and Dsui_1750 are separated by 13 nucleotides Dsui_1750 and Dsui_1751 are separated by 64 nucleotides
Dsui_1749: Dsui_1749 - flagellar motor switch protein FliM, at 1,835,886 to 1,836,890
_1749
Dsui_1750: Dsui_1750 - flagellar basal body-associated protein, at 1,836,904 to 1,837,434
_1750
Dsui_1751: Dsui_1751 - flagellar hook-length control protein, at 1,837,499 to 1,838,620
_1751
Position (kb)
1836
1837
1838 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1835.911 kb on + strand at 1835.911 kb on + strand at 1835.939 kb on + strand at 1836.023 kb on - strand, within Dsui_1749 at 1836.071 kb on - strand, within Dsui_1749 at 1836.091 kb on + strand, within Dsui_1749 at 1836.196 kb on + strand, within Dsui_1749 at 1836.196 kb on + strand, within Dsui_1749 at 1836.201 kb on - strand, within Dsui_1749 at 1836.204 kb on - strand, within Dsui_1749 at 1836.204 kb on - strand, within Dsui_1749 at 1836.232 kb on - strand, within Dsui_1749 at 1836.296 kb on - strand, within Dsui_1749 at 1836.428 kb on + strand, within Dsui_1749 at 1836.535 kb on - strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.556 kb on - strand, within Dsui_1749 at 1836.556 kb on - strand, within Dsui_1749 at 1836.565 kb on + strand, within Dsui_1749 at 1836.589 kb on - strand, within Dsui_1749 at 1836.643 kb on - strand, within Dsui_1749 at 1836.679 kb on - strand, within Dsui_1749 at 1836.689 kb on - strand, within Dsui_1749 at 1836.725 kb on + strand, within Dsui_1749 at 1836.725 kb on + strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.766 kb on + strand, within Dsui_1749 at 1836.841 kb on + strand at 1836.841 kb on + strand at 1836.841 kb on + strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.879 kb on + strand at 1836.950 kb on + strand at 1836.957 kb on - strand, within Dsui_1750 at 1837.086 kb on + strand, within Dsui_1750 at 1837.132 kb on - strand, within Dsui_1750 at 1837.142 kb on - strand, within Dsui_1750 at 1837.177 kb on - strand, within Dsui_1750 at 1837.318 kb on - strand, within Dsui_1750 at 1837.432 kb on - strand at 1837.441 kb on - strand at 1837.444 kb on - strand at 1837.451 kb on - strand at 1837.496 kb on + strand at 1837.501 kb on + strand at 1837.513 kb on + strand at 1837.516 kb on - strand at 1837.517 kb on - strand at 1837.517 kb on - strand at 1837.591 kb on - strand at 1837.596 kb on - strand at 1837.630 kb on - strand, within Dsui_1751 at 1837.640 kb on - strand, within Dsui_1751 at 1837.681 kb on + strand at 1837.706 kb on - strand, within Dsui_1751 at 1837.718 kb on - strand, within Dsui_1751 at 1837.762 kb on + strand, within Dsui_1751 at 1837.765 kb on - strand, within Dsui_1751 at 1837.775 kb on - strand, within Dsui_1751 at 1837.787 kb on - strand, within Dsui_1751 at 1837.787 kb on - strand, within Dsui_1751 at 1837.820 kb on - strand, within Dsui_1751 at 1837.829 kb on - strand, within Dsui_1751 at 1837.829 kb on - strand, within Dsui_1751 at 1837.845 kb on - strand, within Dsui_1751 at 1837.927 kb on - strand, within Dsui_1751 at 1837.976 kb on + strand, within Dsui_1751 at 1838.061 kb on - strand, within Dsui_1751 at 1838.065 kb on + strand, within Dsui_1751 at 1838.132 kb on + strand, within Dsui_1751 at 1838.132 kb on + strand, within Dsui_1751 at 1838.167 kb on + strand, within Dsui_1751 at 1838.321 kb on + strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 1,835,911 + -0.3 1,835,911 + -0.3 1,835,939 + -0.3 1,836,023 - Dsui_1749 0.14 -0.0 1,836,071 - Dsui_1749 0.18 -0.1 1,836,091 + Dsui_1749 0.20 -0.9 1,836,196 + Dsui_1749 0.31 -0.3 1,836,196 + Dsui_1749 0.31 +0.7 1,836,201 - Dsui_1749 0.31 -0.2 1,836,204 - Dsui_1749 0.32 +0.0 1,836,204 - Dsui_1749 0.32 +0.3 1,836,232 - Dsui_1749 0.34 -0.2 1,836,296 - Dsui_1749 0.41 +0.2 1,836,428 + Dsui_1749 0.54 -0.3 1,836,535 - Dsui_1749 0.65 -0.1 1,836,543 + Dsui_1749 0.65 +0.7 1,836,543 + Dsui_1749 0.65 +0.7 1,836,543 + Dsui_1749 0.65 +0.7 1,836,556 - Dsui_1749 0.67 +0.1 1,836,556 - Dsui_1749 0.67 +0.0 1,836,565 + Dsui_1749 0.68 -0.9 1,836,589 - Dsui_1749 0.70 -0.4 1,836,643 - Dsui_1749 0.75 -0.2 1,836,679 - Dsui_1749 0.79 -0.1 1,836,689 - Dsui_1749 0.80 -0.1 1,836,725 + Dsui_1749 0.83 -2.1 1,836,725 + Dsui_1749 0.83 -1.9 1,836,733 - Dsui_1749 0.84 +0.0 1,836,733 - Dsui_1749 0.84 -0.7 1,836,733 - Dsui_1749 0.84 -0.1 1,836,733 - Dsui_1749 0.84 +0.0 1,836,733 - Dsui_1749 0.84 -0.1 1,836,733 - Dsui_1749 0.84 -0.0 1,836,733 - Dsui_1749 0.84 -0.0 1,836,766 + Dsui_1749 0.88 -0.3 1,836,841 + -1.3 1,836,841 + +0.7 1,836,841 + -1.6 1,836,849 - -0.3 1,836,849 - -0.0 1,836,849 - -0.2 1,836,849 - -0.4 1,836,849 - -0.2 1,836,849 - -0.1 1,836,849 - -0.1 1,836,879 + -0.9 1,836,950 + +0.7 1,836,957 - Dsui_1750 0.10 -0.5 1,837,086 + Dsui_1750 0.34 -1.6 1,837,132 - Dsui_1750 0.43 +0.2 1,837,142 - Dsui_1750 0.45 -0.4 1,837,177 - Dsui_1750 0.51 -0.6 1,837,318 - Dsui_1750 0.78 -0.3 1,837,432 - -0.2 1,837,441 - -0.2 1,837,444 - -0.1 1,837,451 - -0.7 1,837,496 + -0.9 1,837,501 + -0.9 1,837,513 + +0.7 1,837,516 - +0.1 1,837,517 - -0.1 1,837,517 - -0.1 1,837,591 - -1.1 1,837,596 - -1.4 1,837,630 - Dsui_1751 0.12 -1.8 1,837,640 - Dsui_1751 0.13 -0.3 1,837,681 + +0.7 1,837,706 - Dsui_1751 0.18 -0.3 1,837,718 - Dsui_1751 0.20 -0.8 1,837,762 + Dsui_1751 0.23 +0.7 1,837,765 - Dsui_1751 0.24 +0.7 1,837,775 - Dsui_1751 0.25 +0.7 1,837,787 - Dsui_1751 0.26 -1.8 1,837,787 - Dsui_1751 0.26 -0.8 1,837,820 - Dsui_1751 0.29 +0.7 1,837,829 - Dsui_1751 0.29 -0.3 1,837,829 - Dsui_1751 0.29 -0.3 1,837,845 - Dsui_1751 0.31 +0.2 1,837,927 - Dsui_1751 0.38 -3.0 1,837,976 + Dsui_1751 0.43 -0.3 1,838,061 - Dsui_1751 0.50 -1.3 1,838,065 + Dsui_1751 0.50 +0.7 1,838,132 + Dsui_1751 0.56 -0.8 1,838,132 + Dsui_1751 0.56 -1.3 1,838,167 + Dsui_1751 0.60 +0.7 1,838,321 + Dsui_1751 0.73 -0.3 1,838,322 - Dsui_1751 0.73 +0.7 1,838,322 - Dsui_1751 0.73 -1.8 1,838,322 - Dsui_1751 0.73 +0.7
Or see this region's nucleotide sequence