Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1660 and Dsui_1661 overlap by 1 nucleotides Dsui_1661 and Dsui_1662 are separated by 119 nucleotides
Dsui_1660: Dsui_1660 - outer membrane cobalamin receptor protein, at 1,743,236 to 1,745,314
_1660
Dsui_1661: Dsui_1661 - hypothetical protein, at 1,745,314 to 1,745,790
_1661
Dsui_1662: Dsui_1662 - Oxidoreductase NAD-binding domain/Flavodoxin, at 1,745,910 to 1,747,262
_1662
Position (kb)
1745
1746 Strain fitness (log2 ratio)
-2
-1
0
1 at 1744.358 kb on - strand, within Dsui_1660 at 1744.417 kb on + strand, within Dsui_1660 at 1744.490 kb on + strand, within Dsui_1660 at 1744.498 kb on - strand, within Dsui_1660 at 1744.526 kb on + strand at 1744.606 kb on + strand, within Dsui_1660 at 1744.766 kb on - strand, within Dsui_1660 at 1745.037 kb on + strand, within Dsui_1660 at 1745.173 kb on - strand at 1745.213 kb on + strand at 1745.327 kb on + strand at 1745.335 kb on - strand at 1745.346 kb on - strand at 1745.377 kb on + strand, within Dsui_1661 at 1745.481 kb on - strand at 1745.493 kb on - strand, within Dsui_1661 at 1745.532 kb on + strand, within Dsui_1661 at 1745.563 kb on - strand, within Dsui_1661 at 1745.574 kb on + strand, within Dsui_1661 at 1745.574 kb on - strand, within Dsui_1661 at 1745.594 kb on + strand, within Dsui_1661 at 1745.599 kb on + strand at 1745.602 kb on - strand at 1745.641 kb on - strand, within Dsui_1661 at 1745.829 kb on - strand at 1745.829 kb on - strand at 1745.839 kb on + strand at 1745.909 kb on - strand at 1745.952 kb on + strand at 1745.960 kb on - strand at 1745.986 kb on - strand at 1746.057 kb on + strand, within Dsui_1662 at 1746.088 kb on - strand, within Dsui_1662 at 1746.134 kb on + strand, within Dsui_1662 at 1746.267 kb on - strand, within Dsui_1662 at 1746.271 kb on + strand, within Dsui_1662 at 1746.308 kb on + strand at 1746.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 1,744,358 - Dsui_1660 0.54 -0.4 1,744,417 + Dsui_1660 0.57 -1.4 1,744,490 + Dsui_1660 0.60 -1.0 1,744,498 - Dsui_1660 0.61 -2.2 1,744,526 + -1.0 1,744,606 + Dsui_1660 0.66 -2.0 1,744,766 - Dsui_1660 0.74 +0.6 1,745,037 + Dsui_1660 0.87 -1.7 1,745,173 - -1.4 1,745,213 + -1.7 1,745,327 + -1.0 1,745,335 - -1.0 1,745,346 - +0.6 1,745,377 + Dsui_1661 0.13 +0.6 1,745,481 - +0.6 1,745,493 - Dsui_1661 0.38 -2.2 1,745,532 + Dsui_1661 0.46 +0.6 1,745,563 - Dsui_1661 0.52 -2.4 1,745,574 + Dsui_1661 0.55 -0.4 1,745,574 - Dsui_1661 0.55 +0.6 1,745,594 + Dsui_1661 0.59 +0.6 1,745,599 + -1.0 1,745,602 - +0.6 1,745,641 - Dsui_1661 0.69 -0.4 1,745,829 - -0.8 1,745,829 - -1.7 1,745,839 + -1.4 1,745,909 - +0.6 1,745,952 + -1.4 1,745,960 - -0.6 1,745,986 - -1.2 1,746,057 + Dsui_1662 0.11 +0.6 1,746,088 - Dsui_1662 0.13 -0.1 1,746,134 + Dsui_1662 0.17 +0.6 1,746,267 - Dsui_1662 0.26 -0.4 1,746,271 + Dsui_1662 0.27 +0.6 1,746,308 + -1.0 1,746,436 + -0.4
Or see this region's nucleotide sequence