Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1643 and Dsui_1644 are separated by 19 nucleotides Dsui_1644 and Dsui_1645 are separated by 10 nucleotides Dsui_1645 and Dsui_1646 are separated by 96 nucleotides
Dsui_1643: Dsui_1643 - uncharacterized protein involved in response to NO, at 1,725,150 to 1,726,367
_1643
Dsui_1644: Dsui_1644 - hypothetical protein, at 1,726,387 to 1,726,773
_1644
Dsui_1645: Dsui_1645 - hemerythrin HHE cation binding domain-containing protein, at 1,726,784 to 1,727,362
_1645
Dsui_1646: Dsui_1646 - cAMP-binding protein, at 1,727,459 to 1,728,205
_1646
Position (kb)
1726
1727 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1725.758 kb on + strand, within Dsui_1643 at 1725.758 kb on - strand at 1725.849 kb on - strand at 1725.949 kb on + strand, within Dsui_1643 at 1725.957 kb on - strand, within Dsui_1643 at 1726.000 kb on + strand, within Dsui_1643 at 1726.021 kb on - strand at 1726.115 kb on + strand, within Dsui_1643 at 1726.188 kb on - strand, within Dsui_1643 at 1726.279 kb on + strand at 1726.372 kb on + strand at 1726.446 kb on + strand, within Dsui_1644 at 1726.547 kb on - strand, within Dsui_1644 at 1726.598 kb on - strand, within Dsui_1644 at 1726.609 kb on + strand, within Dsui_1644 at 1726.665 kb on + strand, within Dsui_1644 at 1726.699 kb on + strand, within Dsui_1644 at 1726.740 kb on - strand at 1726.796 kb on - strand at 1726.898 kb on - strand, within Dsui_1645 at 1726.946 kb on - strand, within Dsui_1645 at 1727.089 kb on + strand, within Dsui_1645 at 1727.114 kb on + strand, within Dsui_1645 at 1727.151 kb on - strand, within Dsui_1645 at 1727.186 kb on + strand, within Dsui_1645 at 1727.357 kb on + strand at 1727.357 kb on + strand at 1727.357 kb on + strand at 1727.374 kb on + strand at 1727.374 kb on + strand at 1727.382 kb on - strand at 1727.382 kb on - strand at 1727.382 kb on - strand at 1727.382 kb on - strand at 1727.382 kb on - strand at 1727.382 kb on - strand at 1727.387 kb on - strand at 1727.419 kb on + strand at 1727.422 kb on + strand at 1727.467 kb on + strand at 1727.467 kb on + strand at 1727.471 kb on - strand at 1727.475 kb on + strand at 1727.619 kb on + strand at 1727.629 kb on + strand, within Dsui_1646 at 1727.726 kb on - strand, within Dsui_1646 at 1727.737 kb on - strand, within Dsui_1646
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 1,725,758 + Dsui_1643 0.50 -0.4 1,725,758 - +0.6 1,725,849 - -1.7 1,725,949 + Dsui_1643 0.66 -0.9 1,725,957 - Dsui_1643 0.66 +0.6 1,726,000 + Dsui_1643 0.70 -0.4 1,726,021 - -0.4 1,726,115 + Dsui_1643 0.79 -1.3 1,726,188 - Dsui_1643 0.85 -1.0 1,726,279 + -1.4 1,726,372 + -0.7 1,726,446 + Dsui_1644 0.15 -1.7 1,726,547 - Dsui_1644 0.41 -1.0 1,726,598 - Dsui_1644 0.55 -0.4 1,726,609 + Dsui_1644 0.57 -1.6 1,726,665 + Dsui_1644 0.72 -0.3 1,726,699 + Dsui_1644 0.81 -1.0 1,726,740 - -2.9 1,726,796 - +0.6 1,726,898 - Dsui_1645 0.20 -1.7 1,726,946 - Dsui_1645 0.28 -0.4 1,727,089 + Dsui_1645 0.53 -1.9 1,727,114 + Dsui_1645 0.57 -0.5 1,727,151 - Dsui_1645 0.63 -2.2 1,727,186 + Dsui_1645 0.69 -1.0 1,727,357 + -0.8 1,727,357 + -1.2 1,727,357 + -1.9 1,727,374 + -0.7 1,727,374 + +0.8 1,727,382 - -1.0 1,727,382 - +0.6 1,727,382 - -2.4 1,727,382 - +0.6 1,727,382 - -1.0 1,727,382 - +0.6 1,727,387 - -1.0 1,727,419 + -1.6 1,727,422 + -2.7 1,727,467 + +0.6 1,727,467 + -0.4 1,727,471 - -0.1 1,727,475 + -2.2 1,727,619 + +0.6 1,727,629 + Dsui_1646 0.23 -1.7 1,727,726 - Dsui_1646 0.36 -0.4 1,727,737 - Dsui_1646 0.37 -0.1
Or see this region's nucleotide sequence